{"id":"W2892277051","doi":"10.1101/418467","title":"Phylogeny, evidence for a cryptic plastid, and distribution of <i>Chytriodinium</i> parasites (Dinophyceae) infecting copepods","year":2018,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Protist diversity and phylogeny","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of British Columbia","funders":"FP7 People: Marie-Curie Actions; Tula Foundation; Gordon and Betty Moore Foundation; David and Lucile Packard Foundation","keywords":"Biology; Dinophyceae; Phylogenetics; Dothideomycetes; Phylogenetic tree; Sporangium; Dinoflagellate; Clade; Population; Plastid; Evolutionary biology; Botany; Gene; Ecology; Genetics; Spore; Chloroplast; Phytoplankton","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000114627,0.000166416,0.0001293922,0.0007978468,0.0002459328,0.0003587816,0.0001317859,0.0002407108,0.0008886132],"category_scores_gemma":[0.0001922002,0.00011654,0.0001110576,0.0005480957,0.0002381772,0.0001654417,0.0002761208,0.0001633304,0.0002700571],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001642323,"about_ca_system_score_gemma":0.0001245988,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001400957,"about_ca_topic_score_gemma":0.001762599,"domain_scores_codex":[0.999886,0.00001274653,0.000009542346,0.000052849,0.00001583687,0.00002295911],"domain_scores_gemma":[0.9997136,0.0000537557,0.0001157439,0.00002024454,0.00003545696,0.00006109331],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0002803112,0.00002081663,0.2502905,0.00009791295,0.00003814267,0.0001303359,0.0004091241,0.000167939,0.742382,0.0001376453,0.0000753875,0.005969901],"study_design_scores_gemma":[0.000003960673,0.00006545625,0.9919625,0.00001086591,0.00001548903,0.0002357874,0.0002699943,0.000366966,0.006246424,0.00003522381,0.0007833598,0.000004010691],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9986261,0.0002267968,0.0002785971,0.00001428699,0.000001006211,0.00000266274,0.0002970697,0.000008327404,0.0005452523],"genre_scores_gemma":[0.9986467,0.0001143887,0.0003882512,0.000009876724,0.000001843504,0.000003204131,0.0006568822,0.000003847238,0.0001751426],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001400957,"threshold_uncertainty_score":0.002972722,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02397948942015022,"score_gpt":0.2553356781011443,"score_spread":0.2313561886809941,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}