{"id":"W2892686440","doi":"10.1111/mpp.12750","title":"Characterization of CRISPR‐Cas systems in the <i>Ralstonia solanacearum</i> species complex","year":2018,"lang":"en","type":"article","venue":"Molecular Plant Pathology","topic":"Plant Pathogenic Bacteria Studies","field":"Agricultural and Biological Sciences","cited_by":21,"is_retracted":false,"has_abstract":true,"ca_institutions":"Université Laval","funders":"Natural Sciences and Engineering Research Council of Canada; Fundação de Amparo à Pesquisa do Estado de Minas Gerais","keywords":"Ralstonia solanacearum; Biology; CRISPR; Phylotype; Genome; Genetics; DNA; Palindrome; Gene; Computational biology; Phylogenetics; Bacteria","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003764986,0.0001399654,0.0002771422,0.00002316606,0.0001001212,0.00002651035,0.0003224401,0.00009789061,0.00004621671],"category_scores_gemma":[0.00003674586,0.00005214052,0.00005179575,0.0002268655,0.000180237,0.00004102583,0.00007885478,0.00009033504,0.00003053755],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0000117534,"about_ca_system_score_gemma":0.000005318204,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00006532102,"about_ca_topic_score_gemma":0.0004402573,"domain_scores_codex":[0.99866,0.000368119,0.0002922786,0.0002414543,0.0001594694,0.0002786684],"domain_scores_gemma":[0.9995781,0.00009888635,0.0001495788,0.00009633517,0.00005340216,0.00002374708],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.00002684395,0.00004117651,0.002618709,0.000006803771,0.000007871334,0.0001612012,0.0002888379,3.408527e-7,0.9955766,0.0008805729,0.0001617506,0.0002293313],"study_design_scores_gemma":[0.0001336728,0.0002923958,0.7977971,0.00002254451,0.00001508304,0.0004803437,0.0003048427,0.00005706743,0.1915937,0.00003193764,0.009115579,0.0001556901],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9970062,0.00009222521,0.0001074987,0.0007909338,0.000206978,0.0002601616,0.0007998336,0.00002356126,0.0007126349],"genre_scores_gemma":[0.9986356,0.00005603654,0.00002478719,0.00046598,0.0001364744,0.00001965214,0.000628061,0.0000011232,0.00003228479],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.8039829,"threshold_uncertainty_score":0.2126229,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02860681472576735,"score_gpt":0.2153100981864471,"score_spread":0.1867032834606797,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}