{"id":"W2892850306","doi":"10.1128/mra.01109-18","title":"Genome Sequence of a Plant-Pathogenic Bacterium, “Candidatus Phytoplasma asteris” Strain TW1","year":2018,"lang":"en","type":"article","venue":"Microbiology Resource Announcements","topic":"Phytoplasmas and Hemiptera pathogens","field":"Agricultural and Biological Sciences","cited_by":14,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Saskatchewan; Agriculture and Agri-Food Canada","funders":"Oxford Nanopore Technologies; Western Grains Research Foundation","keywords":"Strain (injury); Biology; Whole genome sequencing; 16S ribosomal RNA; Genome; Sequence (biology); Gene; Candidatus; Phytoplasma; Genetics; Bacteria; Sequence analysis; Botany; Polymerase chain reaction; Restriction fragment length polymorphism","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002555879,0.0009207443,0.0007669868,0.001593696,0.0009247693,0.0009035954,0.0006344836,0.0007299251,0.004032345],"category_scores_gemma":[0.0009174362,0.000345221,0.0006087596,0.003664929,0.0002767369,0.0003519982,0.0003523031,0.001292001,0.002609382],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.001714362,"about_ca_system_score_gemma":0.005132981,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.08050187,"about_ca_topic_score_gemma":0.07086747,"domain_scores_codex":[0.9998366,0.00001042304,0.00001597648,0.00004268406,0.00006115439,0.00003312781],"domain_scores_gemma":[0.999435,0.00008981682,0.0001052311,0.00003770646,0.0002307392,0.0001014978],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.001877177,0.000249659,0.007701128,0.002591779,0.0001077436,0.001322889,0.0009750478,0.002982503,0.9297653,0.0009181452,0.01780601,0.03370259],"study_design_scores_gemma":[0.0004277936,0.001043619,0.4059711,0.001311633,0.001045301,0.003066165,0.00286272,0.01114396,0.1868259,0.001413409,0.3845304,0.0003579456],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"dataset","genre_gemma":"empirical","genre_scores_codex":[0.3362851,0.002949837,0.01349393,0.001289735,0.0003988201,0.0004207708,0.6355536,0.001452622,0.008155608],"genre_scores_gemma":[0.1300864,0.002634471,0.0190011,0.000262209,0.00005257485,0.0001829435,0.8396096,0.0003035674,0.007867076],"genre_candidate":"empirical","genre_consensus":null,"teacher_disagreement_score":0.08050187,"threshold_uncertainty_score":0.1600665,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02402442935641082,"score_gpt":0.2225421383233065,"score_spread":0.1985177089668957,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}