{"id":"W2892850306","doi":"10.1128/mra.01109-18","title":"Genome Sequence of a Plant-Pathogenic Bacterium, “Candidatus Phytoplasma asteris” Strain TW1","year":2018,"lang":"en","type":"article","venue":"Microbiology Resource Announcements","topic":"Phytoplasmas and Hemiptera pathogens","field":"Agricultural and Biological Sciences","cited_by":14,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Saskatchewan; Agriculture and Agri-Food Canada","funders":"Oxford Nanopore Technologies; Western Grains Research Foundation","keywords":"Strain (injury); Biology; Whole genome sequencing; 16S ribosomal RNA; Genome; Sequence (biology); Gene; Candidatus; Phytoplasma; Genetics; Bacteria; Sequence analysis; Botany; Polymerase chain reaction; Restriction fragment length polymorphism","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.000252828,0.0002770965,0.0003931411,0.00002943686,0.0002276916,0.00003243351,0.0005059106,0.0002036108,0.001252356],"category_scores_gemma":[0.00001502327,0.000132273,0.0001322389,0.0002423585,0.0003804511,0.00008397955,0.0002049719,0.0001480664,0.0002421],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00004225463,"about_ca_system_score_gemma":0.00002123816,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00001098577,"about_ca_topic_score_gemma":0.0001597728,"domain_scores_codex":[0.9981602,0.000120729,0.0004421716,0.0005401947,0.0001044197,0.0006322392],"domain_scores_gemma":[0.9993114,0.00005107616,0.0002483157,0.0001663318,0.0001076749,0.0001151955],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0001369562,0.00008919333,0.02845622,0.00001002371,0.00004528575,0.00001249335,0.0001922865,3.812052e-7,0.968058,0.000009623798,0.0005723341,0.002417237],"study_design_scores_gemma":[0.00044164,0.00101157,0.02959825,0.00004646723,0.00002619809,0.0001768783,0.0002128839,0.000008273717,0.01684999,0.00002942261,0.9512357,0.0003627502],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9600585,0.0001188154,0.00000276987,0.000117977,0.0002108449,0.0002499067,0.0376376,0.00004432556,0.001559227],"genre_scores_gemma":[0.9854736,0.00003432191,0.0001352552,0.0005010642,0.0004375652,0.00002057451,0.01248295,0.000003368373,0.000911285],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.951208,"threshold_uncertainty_score":0.9996606,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02402442935641082,"score_gpt":0.2225421383233065,"score_spread":0.1985177089668957,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}