{"id":"W2892854479","doi":"10.1128/mra.00853-18","title":"Complete Genome Sequences of Historic Clostridioides difficile Food-Dwelling Ribotype 078 Strains in Canada Identical to That of the Historic Human Clinical Strain M120 in the United Kingdom","year":2018,"lang":"en","type":"article","venue":"Microbiology Resource Announcements","topic":"Clostridium difficile and Clostridium perfringens research","field":"Medicine","cited_by":13,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Laboratory Directed Research and Development; Los Alamos National Laboratory; National Institute of Diabetes and Digestive and Kidney Diseases","keywords":"Clostridium difficile; Clostridioides; Strain (injury); Whole genome sequencing; Biology; Microbiology; Genome; Gene; Genetics; Antibiotics","routes":{"ca_aff":false,"ca_fund":false,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002589693,0.0008222418,0.0007414437,0.002507874,0.001658589,0.0008978306,0.000808859,0.000531944,0.0031749],"category_scores_gemma":[0.0008505069,0.000329303,0.0005857029,0.006330076,0.0003805723,0.0002162327,0.0004417167,0.0008468094,0.001412194],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.005615593,"about_ca_system_score_gemma":0.01676442,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_topic_score_codex":0.8398253,"about_ca_topic_score_gemma":0.881075,"domain_scores_codex":[0.9994823,0.00001767602,0.00002641634,0.00007732641,0.000232949,0.0001633057],"domain_scores_gemma":[0.9989421,0.00005960047,0.000139751,0.0000437026,0.0006231734,0.000191711],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.005670339,0.0005618529,0.07165107,0.003672406,0.0003335923,0.004253565,0.004656008,0.003368861,0.6818755,0.002638743,0.07313333,0.1481848],"study_design_scores_gemma":[0.0001845951,0.0003158611,0.6284282,0.0004461498,0.0003722147,0.00142008,0.002980981,0.0009097801,0.02353148,0.0003540082,0.3408961,0.0001604672],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"dataset","genre_gemma":"empirical","genre_scores_codex":[0.4296906,0.007753937,0.003873082,0.0008555412,0.0003700837,0.0004182949,0.5364965,0.0005528672,0.01998908],"genre_scores_gemma":[0.303632,0.005578149,0.01488806,0.0004288434,0.00006081133,0.0002179096,0.6623218,0.0002035958,0.01266883],"genre_candidate":"empirical","genre_consensus":null,"teacher_disagreement_score":0.1601747,"threshold_uncertainty_score":0.3222359,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.1199217584985732,"score_gpt":0.3375594263426998,"score_spread":0.2176376678441266,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}