{"id":"W2893330919","doi":"10.1016/j.cbpa.2018.09.003","title":"Insights into the physiology of ammonia-oxidizing microorganisms","year":2018,"lang":"en","type":"review","venue":"Current Opinion in Chemical Biology","topic":"Wastewater Treatment and Nitrogen Removal","field":"Environmental Science","cited_by":255,"is_retracted":false,"has_abstract":false,"ca_institutions":"University of Alberta","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Archaea; Ammonia; Nitrification; Microorganism; Nitrogen cycle; Nitrite; Environmental chemistry; Bacteria; Microbial metabolism; Chemistry; Oxidizing agent; Nitrate; Nitrogen; Biology; Biochemistry; Organic chemistry","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001055366,0.000371876,0.0009595968,0.00006577128,0.00004890602,0.000005936758,0.0007118979,0.0003814126,0.0001755379],"category_scores_gemma":[0.00003136516,0.0002087313,0.0002885684,0.000324263,0.0009148088,0.00003183374,0.0006934634,0.0003577319,0.0003936545],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000190831,"about_ca_system_score_gemma":0.00003279748,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00006348669,"about_ca_topic_score_gemma":0.000005559243,"domain_scores_codex":[0.9980855,0.0002566902,0.0006432954,0.0005963913,0.00009298167,0.0003251359],"domain_scores_gemma":[0.9990169,0.0001892744,0.0003212234,0.0004039739,0.00000827751,0.0000602828],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.00002308268,0.0003781989,0.00009078249,0.002940431,0.00010371,5.444873e-7,0.0006720113,2.148198e-7,0.08309896,0.0001737653,0.001597181,0.9109211],"study_design_scores_gemma":[0.0001932327,0.00006053784,0.00001185194,0.001181828,0.00005124834,0.000006224609,0.000006785275,0.000002092222,0.0118196,0.001564496,0.984868,0.0002341137],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.0178935,0.9798262,0.000003831239,0.00001833125,0.001802138,0.0003930012,0.00001100104,0.00001620929,0.00003586801],"genre_scores_gemma":[0.000679003,0.9976344,0.0008474457,0.000006414228,0.0003859616,0.00006590511,0.0003510102,0.00002293545,0.000006903174],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.9832708,"threshold_uncertainty_score":0.8511814,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.05918537288152132,"score_gpt":0.340454430740924,"score_spread":0.2812690578594027,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}