{"id":"W2896584410","doi":"10.1016/j.jgar.2018.10.012","title":"Rapid and sensitive detection of the vanA resistance gene from clinical Enterococcus faecium and Enterococcus faecalis isolates by loop-mediated isothermal amplification","year":2018,"lang":"en","type":"article","venue":"Journal of Global Antimicrobial Resistance","topic":"Antimicrobial Resistance in Staphylococcus","field":"Medicine","cited_by":8,"is_retracted":false,"has_abstract":false,"ca_institutions":"University of Calgary","funders":"National Natural Science Foundation of China","keywords":"Loop-mediated isothermal amplification; Enterococcus faecalis; Enterococcus faecium; Enterococcus; Microbiology; Gene; Biology; Genetics; Antibiotics; DNA; Escherichia coli","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.000637495,0.0004030386,0.0009819309,0.00007949492,0.0002513762,0.00007958453,0.0003246059,0.0003278147,0.00001516819],"category_scores_gemma":[0.0006984005,0.0003088493,0.0003357689,0.0004887632,0.001512524,0.0002656767,0.0001369781,0.0005026084,0.000006174394],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002520191,"about_ca_system_score_gemma":0.000196355,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00007907195,"about_ca_topic_score_gemma":0.0007386263,"domain_scores_codex":[0.996525,0.0003580832,0.001639138,0.0005743285,0.0004523283,0.0004511052],"domain_scores_gemma":[0.9960256,0.0003182661,0.001798061,0.0004774231,0.001100169,0.0002805298],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.007996147,0.0002525684,0.03341767,0.0001161993,0.0003208699,0.00002605435,0.0001366586,2.504595e-7,0.9463921,0.00002206671,0.009329895,0.001989532],"study_design_scores_gemma":[0.006396594,0.000772997,0.3786576,0.001947846,0.0006447271,0.0001374717,0.0002051775,0.00003648388,0.5733491,0.0001752364,0.03714348,0.0005332682],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9885386,0.002794299,0.004856948,0.001505554,0.0006884439,0.0005126914,0.0008818604,0.0000243726,0.0001971953],"genre_scores_gemma":[0.9945247,0.001906266,0.001818809,0.0009362297,0.0004757233,0.000002110143,0.00001395086,0.00003636986,0.0002858276],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.373043,"threshold_uncertainty_score":0.9999363,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01191341832246914,"score_gpt":0.2696570429147611,"score_spread":0.2577436245922919,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}