{"id":"W2896967500","doi":"10.1016/j.ijpara.2018.07.001","title":"Validity of the Diplostomoidea and Diplostomida (Digenea, Platyhelminthes) upheld in phylogenomic analysis","year":2018,"lang":"en","type":"article","venue":"International Journal for Parasitology","topic":"Parasite Biology and Host Interactions","field":"Environmental Science","cited_by":104,"is_retracted":false,"has_abstract":false,"ca_institutions":"","funders":"Natural Sciences and Engineering Research Council of Canada; Puerto Rico Science, Technology and Research Trust; National Science Foundation; Winona State University; Ontario Genomics Institute; Genome Canada; Concordia University","keywords":"Paraphyly; Biology; Monophyly; Clade; Phylogenetics; Digenea; Evolutionary biology; Phylogenetic tree; Zoology; Genome; Genetics; Gene; Trematoda; Helminths","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002745469,0.00009258871,0.0001836302,0.0001355012,0.0001462429,0.00001493669,0.0004241616,0.00008965038,0.0005346314],"category_scores_gemma":[0.0001497679,0.00006788643,0.0001463434,0.0001639308,0.0004372884,0.00009733866,0.0001228394,0.0001583705,0.00004417863],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001107546,"about_ca_system_score_gemma":0.00001691228,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001611273,"about_ca_topic_score_gemma":0.002153741,"domain_scores_codex":[0.9991146,0.000103472,0.0003095134,0.00017862,0.0001266097,0.0001672048],"domain_scores_gemma":[0.9993166,0.0002430573,0.0002239322,0.0001228979,0.00004867267,0.00004482623],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0001613939,0.00006415336,0.9851426,5.118139e-7,0.0002260784,0.000003796666,0.0002094779,0.0001977295,0.01215932,0.0002697696,0.0001621931,0.001402999],"study_design_scores_gemma":[0.0003013268,0.0001079674,0.981795,0.000005040406,0.00009213541,0.0001677865,0.00003193833,0.0005782065,0.008569561,0.002197878,0.006080222,0.00007291931],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9957666,0.00002229296,0.0009081371,0.0006742575,0.001189928,0.00009659274,0.00004024827,0.000003762349,0.001298149],"genre_scores_gemma":[0.9990508,0.00002644186,0.0002826971,0.0002018048,0.0001630428,0.000008232344,0.000004051109,0.000004884181,0.0002580512],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.005918029,"threshold_uncertainty_score":0.5853839,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02314898135816006,"score_gpt":0.3818657339092014,"score_spread":0.3587167525510414,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}