{"id":"W2897005141","doi":"10.1101/449553","title":"The genome of the plague-resistant great gerbil reveals species-specific duplication of an MHCII gene","year":2018,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"McGill University; Universitetet i Oslo; National Science Council; Norges Forskningsråd; Norwegian Sequencing Centre; National Natural Science Foundation of China","keywords":"Biology; Yersinia pestis; Plague (disease); Genetics; Genome; Virology; Gene; Virulence","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00006932225,0.0003421207,0.0002483482,0.0004224386,0.0001962644,0.0002932822,0.0001467063,0.0003157507,0.001127945],"category_scores_gemma":[0.0001733792,0.0001336777,0.000471614,0.0004145654,0.0001401528,0.0001038861,0.0003109355,0.0003338378,0.0005053718],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001587471,"about_ca_system_score_gemma":0.0001172171,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0005881851,"about_ca_topic_score_gemma":0.0009070285,"domain_scores_codex":[0.9999461,0.000004579761,0.00000315203,0.00002817474,0.000008875185,0.000009166009],"domain_scores_gemma":[0.9998944,0.0000176768,0.00003902523,0.00001418342,0.000009831036,0.00002498413],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0001615392,0.00001271876,0.003516733,0.00009040908,0.00003138293,0.0003237782,0.0000622338,0.0001295029,0.9930909,0.00005216647,0.00009208671,0.002436579],"study_design_scores_gemma":[0.00005688334,0.000818727,0.8250882,0.0001097156,0.0003513478,0.007110051,0.0004086179,0.003056654,0.1388617,0.0004631828,0.02363148,0.00004349269],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9912251,0.0008981506,0.001736183,0.00005887988,0.00002295849,0.00001604449,0.005350058,0.0001071483,0.0005854429],"genre_scores_gemma":[0.9717407,0.0006026701,0.006841576,0.0001014314,0.00001942102,0.00003075762,0.01895595,0.00008071685,0.001626668],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001127945,"threshold_uncertainty_score":0.003773391,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.0166161890838518,"score_gpt":0.2388264269251833,"score_spread":0.2222102378413315,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}