{"id":"W2897171257","doi":"10.1186/s12879-018-3419-8","title":"Genetic characterization of norovirus GII.4 variants circulating in Canada using a metagenomic technique","year":2018,"lang":"en","type":"article","venue":"BMC Infectious Diseases","topic":"Viral gastroenteritis research and epidemiology","field":"Medicine","cited_by":30,"is_retracted":false,"has_abstract":true,"ca_institutions":"McGill University; Health Canada","funders":"Health Canada","keywords":"Biology; Norovirus; Genome; Metagenomics; Genetics; Phylogenetic tree; Virology; Gene; Whole genome sequencing; Genotyping; DNA sequencing; Genotype; Virus","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003773329,0.0005919411,0.0005586303,0.001818426,0.001707194,0.001075536,0.0005007455,0.0003780141,0.0007568576],"category_scores_gemma":[0.0006717056,0.0002303116,0.000597595,0.002701394,0.000399667,0.0002239705,0.0006126664,0.000559876,0.0001691527],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.005875392,"about_ca_system_score_gemma":0.009325181,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_topic_score_codex":0.7885145,"about_ca_topic_score_gemma":0.8567107,"domain_scores_codex":[0.999471,0.00002211047,0.00001325427,0.0001416392,0.0001965337,0.0001554235],"domain_scores_gemma":[0.9996253,0.00002559329,0.0000472094,0.00001695211,0.000231829,0.0000531066],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0007976753,0.000142245,0.6107215,0.0005397645,0.0006230077,0.001205418,0.003644,0.002733072,0.3221786,0.001190052,0.002711345,0.05351331],"study_design_scores_gemma":[0.00002249122,0.0001663586,0.9455552,0.0001192197,0.000432388,0.0006865515,0.004089982,0.006112343,0.0226127,0.0003153128,0.01980943,0.00007804375],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9754396,0.002025043,0.00414231,0.0002742565,0.00003836238,0.0001804792,0.01395994,0.00007529177,0.003864732],"genre_scores_gemma":[0.9695666,0.001929636,0.01197125,0.0003106322,0.00001527261,0.00008827178,0.01350311,0.00005151185,0.002563737],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.2114855,"threshold_uncertainty_score":0.4254619,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02486126005081978,"score_gpt":0.2863138818623444,"score_spread":0.2614526218115246,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}