{"id":"W2897171257","doi":"10.1186/s12879-018-3419-8","title":"Genetic characterization of norovirus GII.4 variants circulating in Canada using a metagenomic technique","year":2018,"lang":"en","type":"article","venue":"BMC Infectious Diseases","topic":"Viral gastroenteritis research and epidemiology","field":"Medicine","cited_by":30,"is_retracted":false,"has_abstract":true,"ca_institutions":"McGill University; Health Canada","funders":"Health Canada","keywords":"Biology; Norovirus; Genome; Metagenomics; Genetics; Phylogenetic tree; Virology; Gene; Whole genome sequencing; Genotyping; DNA sequencing; Genotype; Virus","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001037798,0.0001018656,0.0003050762,0.0001515483,0.00004683781,0.000005799823,0.00005018352,0.00003633813,0.000120169],"category_scores_gemma":[0.0004154786,0.0001005116,0.00005202689,0.0001879004,0.00007089794,0.00005277472,0.00004032639,0.00007564147,0.000003183272],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0005608043,"about_ca_system_score_gemma":0.001395619,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_topic_score_codex":0.546119,"about_ca_topic_score_gemma":0.4732178,"domain_scores_codex":[0.9988879,0.0001650611,0.0003378464,0.0001919985,0.0001230526,0.0002941255],"domain_scores_gemma":[0.9994582,0.00002278928,0.0001190307,0.0001723747,0.00009157805,0.0001360265],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.000061349,0.00004328589,0.7467037,0.00009602864,0.00001820918,0.00003450161,0.000008376833,0.00006571725,0.2523918,0.000002837101,0.000004765219,0.0005694255],"study_design_scores_gemma":[0.0006316065,0.0002049866,0.991626,0.000106052,0.00003987915,0.0001334249,0.00001228584,0.005933345,0.001202225,0.00002839527,0.00001398889,0.00006780439],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9899883,0.00004783549,0.009288572,0.000007915092,0.00008427807,0.0004358115,0.000054443,0.00001989741,0.00007291304],"genre_scores_gemma":[0.9988939,0.00001868241,0.0007089507,0.0001466404,0.000145032,0.00003912429,0.00002585887,0.00001666106,0.000005121179],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.2511896,"threshold_uncertainty_score":0.5363947,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02486126005081978,"score_gpt":0.2863138818623444,"score_spread":0.2614526218115246,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}