{"id":"W2897459516","doi":"10.1097/qad.0000000000002045","title":"Genetic complexity in the replication-competent latent HIV reservoir increases with untreated infection duration in infected youth","year":2018,"lang":"en","type":"article","venue":"AIDS","topic":"HIV Research and Treatment","field":"Immunology and Microbiology","cited_by":20,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of British Columbia; AIDS Vancouver; Simon Fraser University","funders":"Eunice Kennedy Shriver National Institute of Child Health and Human Development; National Institute of Allergy and Infectious Diseases","keywords":"Viremia; Viral replication; Viral load; Biology; Virology; Human immunodeficiency virus (HIV); Immunology; Immune system; Mutation; HIV vaccine; Young adult; Genetic variation; Genetics; Medicine; Virus; Internal medicine; Gene","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002922672,0.00011485,0.0001371991,0.000165561,0.0001406355,0.00001997747,0.000112646,0.00008169278,0.0001689979],"category_scores_gemma":[0.0001145324,0.00007031185,0.00002390759,0.0004806712,0.000245031,0.00006737658,0.00003547743,0.0001670973,0.0004484914],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00009791406,"about_ca_system_score_gemma":0.00006131602,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.01173108,"about_ca_topic_score_gemma":0.01100708,"domain_scores_codex":[0.9986433,0.0005619806,0.0002213502,0.000268399,0.0000529307,0.0002520681],"domain_scores_gemma":[0.999289,0.00009813628,0.0000609437,0.0004389181,0.00009561733,0.00001735436],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0003052303,0.0004458747,0.9932292,0.0000049168,0.0000545998,0.000009301262,0.001003071,0.00001335168,0.003840092,0.00022272,0.0001638616,0.0007077499],"study_design_scores_gemma":[0.001916218,0.0009751777,0.9926466,0.00002989121,0.00002015649,0.00003093615,0.0001343288,0.00002639713,0.003675683,0.00013613,0.0003284283,0.00008009301],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9983612,0.0001023939,0.00005791226,0.0002602467,0.00002584771,0.0005098151,0.00003988156,0.00004002011,0.000602738],"genre_scores_gemma":[0.9987686,0.00003758728,0.0000747903,0.0000556729,0.00002017769,0.0001078542,0.0008253768,0.00000721597,0.0001027062],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001610988,"threshold_uncertainty_score":0.9948499,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03978082155226417,"score_gpt":0.2771723159709247,"score_spread":0.2373914944186605,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}