{"id":"W2898885544","doi":"10.1177/1040638718810744","title":"Validation of an in-house real-time PCR fecal assay and comparison with two commercial assays for the antemortem detection of <i>Mycobacterium avium</i> subsp. <i>paratuberculosis</i> infection in culled sheep","year":2018,"lang":"en","type":"article","venue":"Journal of Veterinary Diagnostic Investigation","topic":"Mycobacterium research and diagnosis","field":"Medicine","cited_by":9,"is_retracted":false,"has_abstract":true,"ca_institutions":"Université de Montréal; Ministère de l'Agriculture, des Pêcheries et de l'Alimentation; Canadian Food Inspection Agency","funders":"Canadian Food Inspection Agency","keywords":"Paratuberculosis; Feces; Biology; Real-time polymerase chain reaction; Flock; Enteritis; Ileum; Microbiology; Polymerase chain reaction; Mycobacterium; Virology; Veterinary medicine; Medicine; Bacteria; Gene","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.006184922,0.001134596,0.0008748674,0.0006467415,0.0003368405,0.001087348,0.0009284954,0.001063658,0.0004267175],"category_scores_gemma":[0.00987426,0.0006170598,0.0007127132,0.0004066855,0.0008897049,0.0003971625,0.0004166895,0.0007635328,0.0003534128],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003982096,"about_ca_system_score_gemma":0.0003928021,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0009778249,"about_ca_topic_score_gemma":0.001489054,"domain_scores_codex":[0.9912485,0.003510852,0.0005243259,0.001994092,0.00237783,0.0003443676],"domain_scores_gemma":[0.9918256,0.003768307,0.001089188,0.0008197665,0.002336244,0.0001609437],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0009440625,0.0006732423,0.03634191,0.0002145439,0.0001136895,0.0001045258,0.0005651368,0.001200134,0.9437777,0.0001327707,0.0001870334,0.01574518],"study_design_scores_gemma":[0.0001421393,0.006212587,0.09911209,0.00008526476,0.0004051057,0.001378569,0.0003711366,0.02984018,0.8592024,0.0001292544,0.003046751,0.00007452729],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9085072,0.0006470986,0.08841651,0.0001100876,0.000157974,0.0004491292,0.0004948053,0.0002517664,0.0009653992],"genre_scores_gemma":[0.8902133,0.0003486795,0.105783,0.0002129421,0.00007068682,0.000628931,0.001560962,0.00008184448,0.001099643],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.006184922,"threshold_uncertainty_score":0.03270936,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03342213061578342,"score_gpt":0.3207535670468366,"score_spread":0.2873314364310532,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}