{"id":"W2899222159","doi":"10.1186/s12917-018-1655-1","title":"Identification and characterization of Staphylococcus devriesei isolates from bovine intramammary infections in KwaZulu-Natal, South Africa","year":2018,"lang":"en","type":"article","venue":"BMC Veterinary Research","topic":"Milk Quality and Mastitis in Dairy Cows","field":"Agricultural and Biological Sciences","cited_by":10,"is_retracted":false,"has_abstract":true,"ca_institutions":"Cascades (Canada)","funders":"University of Pretoria; National Research Foundation","keywords":"rpoB; Mastitis; cons; Biology; Housekeeping gene; Microbiology; Staphylococcus; 16S ribosomal RNA; Staphylococcus aureus; Bacteria; Gene; Genetics","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003699972,0.0007080808,0.0003778116,0.001934573,0.0006090895,0.0007256513,0.000460719,0.0004816091,0.0006876971],"category_scores_gemma":[0.001336776,0.000274355,0.0002275466,0.001700667,0.0004681931,0.0004961376,0.0006084823,0.0002782802,0.0002628995],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0005675291,"about_ca_system_score_gemma":0.0006202343,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.01114295,"about_ca_topic_score_gemma":0.01547892,"domain_scores_codex":[0.9994676,0.00005393938,0.0001113158,0.0001034248,0.000151634,0.0001121688],"domain_scores_gemma":[0.9994076,0.000117062,0.0002251751,0.00002609687,0.0001654002,0.00005862933],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0008103081,0.0004191216,0.4710543,0.001907818,0.0001107458,0.02867936,0.01695842,0.0005102789,0.421695,0.0002874979,0.0006591727,0.05690805],"study_design_scores_gemma":[0.00003543883,0.0007864063,0.9245182,0.0003755737,0.0001560574,0.01936927,0.01263503,0.0005356293,0.0327488,0.0001258048,0.008674577,0.00003914118],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9969831,0.0006074966,0.0004095355,0.0001046898,0.00001663046,0.0001420389,0.0004862207,0.00000795179,0.001242297],"genre_scores_gemma":[0.9956313,0.0007739971,0.001998831,0.00008047111,0.00001133519,0.00007754139,0.0007726715,0.00000631075,0.0006474541],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01114295,"threshold_uncertainty_score":0.02215618,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.1229765694056058,"score_gpt":0.3308280015582029,"score_spread":0.207851432152597,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}