{"id":"W2900048179","doi":"10.1186/s12866-018-1324-3","title":"Genome sequence of the potato pathogenic fungus Alternaria solani HWC-168 reveals clues for its conidiation and virulence","year":2018,"lang":"en","type":"article","venue":"BMC Microbiology","topic":"Fungal Plant Pathogen Control","field":"Agricultural and Biological Sciences","cited_by":21,"is_retracted":false,"has_abstract":true,"ca_institutions":"Agriculture and Agri-Food Canada","funders":"National Key Research and Development Program of China; Earmarked Fund for Modern Agro-industry Technology Research System; Agriculture and Agri-Food Canada; Yangzhou University","keywords":"Biology; Conidiation; Alternaria solani; Alternaria brassicicola; Genome; Gene; Virulence; Genetics; Whole genome sequencing; Pathosystem; Genome project; Fungal protein; Blight; Botany; Arabidopsis; Peptide sequence; Mutant","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009318423,0.0005393989,0.0003372131,0.0005569158,0.0002446019,0.0002359641,0.0001803699,0.0003630953,0.001197159],"category_scores_gemma":[0.0002125051,0.0001607738,0.000501668,0.0008668408,0.0001063624,0.0002069161,0.0001970016,0.0005657036,0.000749978],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000245005,"about_ca_system_score_gemma":0.0004705238,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001956266,"about_ca_topic_score_gemma":0.002441046,"domain_scores_codex":[0.9999406,0.000004697417,0.00000639682,0.00002264222,0.00001643331,0.000009084496],"domain_scores_gemma":[0.9998385,0.00002597238,0.00004366425,0.00001478365,0.00004469353,0.0000324457],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0004287515,0.00007258556,0.007643914,0.0006168031,0.00004393741,0.0006805867,0.0001560991,0.0005111016,0.9769357,0.0001180049,0.0006618496,0.01213065],"study_design_scores_gemma":[0.0004207271,0.001408545,0.5882854,0.0003835067,0.0009205937,0.007461124,0.00120548,0.01460717,0.3051102,0.001580606,0.07847517,0.00014156],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9676974,0.002518242,0.005852557,0.0002765434,0.00006629084,0.00008420065,0.02182033,0.0003107064,0.001373668],"genre_scores_gemma":[0.833541,0.0024366,0.02324257,0.0001763386,0.00004906053,0.000105467,0.1380371,0.0001524875,0.002259357],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001956266,"threshold_uncertainty_score":0.004004896,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02908648346578459,"score_gpt":0.2288956262602388,"score_spread":0.1998091427944542,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}