{"id":"W2900332221","doi":"10.1534/g3.118.200865","title":"Draft Genome Assembly and Population Genetics of an Agricultural Pollinator, the Solitary Alkali Bee (Halictidae: <i>Nomia melanderi</i> )","year":2019,"lang":"en","type":"article","venue":"G3 Genes Genomes Genetics","topic":"Plant and animal studies","field":"Agricultural and Biological Sciences","cited_by":31,"is_retracted":false,"has_abstract":true,"ca_institutions":"York University","funders":"Smithsonian Tropical Research Institute; National Institute of Food and Agriculture; University of Illinois at Urbana-Champaign; Schweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung; Agricultural Research Service; Utah Agricultural Experiment Station; Utah State University; U.S. Department of Agriculture; Smithsonian Institution; National Science Foundation","keywords":"Halictidae; Biology; Pollinator; Genome; Population; Genetics; Evolutionary biology; Zoology; Ecology; Pollen; Pollination; Gene; Apoidea; Hymenoptera; Demography","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001881826,0.0002877268,0.0003558472,0.00001800051,0.000314287,0.00007822913,0.0003922511,0.000146743,0.0000427554],"category_scores_gemma":[0.000001818627,0.0001102555,0.0001124118,0.0002282188,0.00009307488,0.00008710467,0.000230087,0.0001068684,0.0000197823],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0000238662,"about_ca_system_score_gemma":0.00001002353,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000248246,"about_ca_topic_score_gemma":0.00141764,"domain_scores_codex":[0.9983903,0.0001007039,0.0003814958,0.0004157216,0.0002961256,0.0004156366],"domain_scores_gemma":[0.9994016,0.00009221747,0.0001922852,0.00008755193,0.0001011827,0.0001251589],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.00002714863,0.00005001184,0.1187894,0.00002411472,0.0000675904,0.000001737037,0.0003219793,0.0001613114,0.7142674,0.0000785154,0.00003778522,0.166173],"study_design_scores_gemma":[0.0002014489,0.0005102135,0.960991,0.000008414007,0.00006285159,0.00002920385,0.00118043,0.0001996151,0.006182672,0.0001782666,0.03010124,0.000354598],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.8263128,0.1725676,8.152112e-7,0.0002785776,0.00009192013,0.0003339924,0.0001386772,0.00003302112,0.0002425812],"genre_scores_gemma":[0.9602068,0.03867693,0.0002125358,0.0001575356,0.0003796383,0.0000100354,0.0001492804,0.000004025339,0.0002031948],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.8422017,"threshold_uncertainty_score":0.4496088,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.0186724220754953,"score_gpt":0.2075890689336667,"score_spread":0.1889166468581714,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}