{"id":"W2901189551","doi":"","title":"Allelic decomposition and exact genotyping of highly polymorphic and structurally variant genes","year":2018,"lang":"en","type":"article","venue":"RePEc: Research Papers in Economics","topic":"Nutrition, Genetics, and Disease","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"Simon Fraser University","funders":"","keywords":"Genotyping; Biology; Genetics; Gene; Computational biology; DNA sequencing; Genome; Allele; Genotype","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.004233151,0.0005510083,0.001215759,0.00151411,0.0003570549,0.001388787,0.000788014,0.0004911454,0.002129528],"category_scores_gemma":[0.01060368,0.0004264674,0.0007749012,0.001480437,0.0008388574,0.0008964215,0.001555143,0.001103696,0.0003902161],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0006462627,"about_ca_system_score_gemma":0.001061509,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.002559792,"about_ca_topic_score_gemma":0.003153673,"domain_scores_codex":[0.9978094,0.001126494,0.0001193347,0.0003855477,0.0004381957,0.0001211281],"domain_scores_gemma":[0.9946233,0.003889082,0.0005605046,0.000540013,0.0002483952,0.0001387939],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"simulation_or_modeling","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0006870212,0.0001769501,0.02766487,0.0001584772,0.0002325584,0.0002966883,0.0001192281,0.7122456,0.01596561,0.05076572,0.003792939,0.1878943],"study_design_scores_gemma":[0.00004222351,0.00005062272,0.002654606,0.000008726221,0.00001616366,0.0001017448,0.0000259471,0.934179,0.004094883,0.05744894,0.001356274,0.00002090275],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"methods","genre_gemma":"empirical","genre_scores_codex":[0.06956065,0.0001573518,0.9273892,0.0002491462,0.00002347151,0.00004910772,0.0006475791,0.0009296706,0.0009937839],"genre_scores_gemma":[0.3796251,0.0001375225,0.6170549,0.0001704497,0.00002908524,0.0001097983,0.001450681,0.0002297239,0.001192681],"genre_candidate":"empirical","genre_consensus":null,"teacher_disagreement_score":0.004233151,"threshold_uncertainty_score":0.02238733,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01194010109305462,"score_gpt":0.2854529929648368,"score_spread":0.2735128918717822,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}