{"id":"W2901682596","doi":"10.1128/mra.01173-18","title":"Draft Genome Sequence of <i>Lactobacillus kosoi</i> NBRC 113063, Isolated from Kôso, a Japanese Sugar-Vegetable Fermented Beverage","year":2018,"lang":"en","type":"article","venue":"Microbiology Resource Announcements","topic":"Microbial Metabolites in Food Biotechnology","field":"Nursing","cited_by":2,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Beef Cattle Research Council; University of Tokyo","keywords":"Lactobacillus; Sugar; Fermentation; Food science; Lactic acid; Bacteria; Whole genome sequencing; Microbiology; Biology; Genome; Gene; Biochemistry; Genetics","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0005070421,0.0007211663,0.001139675,0.0004187909,0.0004015258,0.00005557553,0.001475212,0.001049522,0.0007835269],"category_scores_gemma":[0.0001938068,0.0007029757,0.0002292077,0.0009766363,0.001896465,0.0001912102,0.0007430347,0.0007217283,0.0007730537],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003278213,"about_ca_system_score_gemma":0.00007018069,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0008210214,"about_ca_topic_score_gemma":0.0001538583,"domain_scores_codex":[0.995203,0.0005072324,0.001264084,0.001359575,0.0002056907,0.001460432],"domain_scores_gemma":[0.9970086,0.0001269294,0.0007574005,0.001507904,0.0004320758,0.0001671255],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","study_design_scores_codex":[0.001488923,0.0003305325,0.002994183,0.00004515024,0.0003584696,0.00002411876,0.002180165,0.000007232421,0.9883075,0.000009167527,0.003749315,0.0005052777],"study_design_scores_gemma":[0.003028688,0.001550599,0.0001924325,0.0001659028,0.0001653099,0.0001472199,0.0004143406,0.00004775023,0.2138274,0.0001002163,0.779595,0.0007650757],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9861371,0.00159126,0.0001078363,0.0007647496,0.00208476,0.001085248,0.006616937,0.0003421974,0.001269943],"genre_scores_gemma":[0.9857082,0.00005100132,0.0009819682,0.003614955,0.0003861709,0.00003751236,0.007131985,0.000113941,0.001974237],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.7758457,"threshold_uncertainty_score":0.9995421,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01589863529623348,"score_gpt":0.2480328458794252,"score_spread":0.2321342105831917,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}