{"id":"W2901994125","doi":"10.1074/mcp.ra118.000757","title":"A High-throughput Bead-based Affinity Assay Enables Analysis of Genital Protein Signatures in Women At Risk of HIV Infection","year":2018,"lang":"en","type":"article","venue":"Molecular & Cellular Proteomics","topic":"Molecular Biology Techniques and Applications","field":"Biochemistry, Genetics and Molecular Biology","cited_by":6,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Manitoba; Public Health Agency of Canada","funders":"Fogarty International Center; Canadian Institutes of Health Research; Center for AIDS Research, University of Washington; Science for Life Laboratory; VINNOVA; Knut och Alice Wallenbergs Stiftelse; National Institutes of Health; Government of Canada; Vetenskapsrådet; National Institute of Allergy and Infectious Diseases; Familjen Erling-Perssons Stiftelse","keywords":"Human immunodeficiency virus (HIV); Bead; Throughput; Computational biology; Magnetic bead; Chromatography; Chemistry; Virology; Biology; Computer science; Materials science","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0007482457,0.0002893466,0.000476741,0.0003319079,0.00009358496,0.00001197288,0.0003082131,0.0004908881,0.00005517694],"category_scores_gemma":[0.0001495697,0.0002941898,0.0003199916,0.0007939952,0.0003654724,0.000005262251,0.0002330823,0.000206458,0.000002999585],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00009031146,"about_ca_system_score_gemma":0.000123606,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0003395182,"about_ca_topic_score_gemma":0.000226135,"domain_scores_codex":[0.9978436,0.0003982684,0.0005574959,0.0006183053,0.000206011,0.0003763],"domain_scores_gemma":[0.9982985,0.0000149992,0.0004938024,0.0008648852,0.0002441928,0.00008360053],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0002451418,0.0002649653,0.004387933,0.00003971373,0.0005002753,0.000005276158,0.00004523844,0.00299223,0.9910336,0.0002840795,0.00004233864,0.0001591681],"study_design_scores_gemma":[0.0005923628,0.0005290394,0.002299604,0.00001848091,0.0002476772,7.312125e-7,0.00001196153,0.001698352,0.9933906,0.0003256936,0.0006037608,0.0002817479],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.8504375,0.0001719579,0.1481213,0.00003479728,0.00001842534,0.0009393449,0.0001689394,0.00002136044,0.0000864002],"genre_scores_gemma":[0.9783657,0.00003484189,0.02045465,0.00007709088,0.00003984373,0.000437755,0.0004829015,0.00003973882,0.00006753155],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1279282,"threshold_uncertainty_score":0.999951,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.004224613358675245,"score_gpt":0.2196580203736274,"score_spread":0.2154334070149522,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}