{"id":"W2902168153","doi":"10.1136/bmjopen-2018-024263","title":"Cohort profile: the Buffalo OsteoPerio microbiome prospective cohort study","year":2018,"lang":"en","type":"article","venue":"BMJ Open","topic":"Oral microbiology and periodontitis research","field":"Dentistry","cited_by":28,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"National Institute of Dental and Craniofacial Research; National Institute of Allergy and Infectious Diseases; Canadian Institutes of Health Research; University at Buffalo; MedStar Health Research Institute; National Heart, Lung, and Blood Institute; University of Nevada, Reno; Women's Health Initiative; U.S. Department of Health and Human Services; National Institutes of Health; Ohio State University; Medical Research and Materiel Command; University of Pittsburgh; Wake Forest University; University of Minnesota; Brigham and Women's Hospital","keywords":"Medicine; Oral Microbiome; Microbiome; Cohort; Cohort study; Prospective cohort study; Disease; Observational study; Internal medicine; Bioinformatics","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001353305,0.0003607123,0.0006256844,0.0006202128,0.001312078,0.0006459717,0.0005445217,0.0005324049,0.00568202],"category_scores_gemma":[0.002412403,0.000368937,0.0005472309,0.001522827,0.0002128413,0.0004328786,0.001231172,0.0008249714,0.001098858],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0005362526,"about_ca_system_score_gemma":0.001411607,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0303591,"about_ca_topic_score_gemma":0.03982085,"domain_scores_codex":[0.9990778,0.0002012121,0.00007190173,0.0002603424,0.0002502628,0.0001384979],"domain_scores_gemma":[0.998751,0.0001026741,0.0002909788,0.0002010581,0.0003697174,0.0002845174],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.001175878,0.0001179327,0.9842554,0.0001326882,0.0003617233,0.0002148292,0.0003002125,0.00007536038,0.00152671,0.0001847613,0.007397397,0.004257105],"study_design_scores_gemma":[0.0002374109,0.000239189,0.9921464,0.00008395403,0.0002257407,0.0003146549,0.0002537452,0.0002126744,0.0001501525,0.0001174663,0.005999984,0.00001870311],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9336702,0.001544671,0.001835789,0.000723941,0.00007428619,0.0009318399,0.0569052,0.0000594569,0.00425459],"genre_scores_gemma":[0.9610635,0.001091048,0.002927926,0.0008013877,0.0001539665,0.002834517,0.02633053,0.00007745704,0.004719716],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0303591,"threshold_uncertainty_score":0.06036478,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.0474870871027396,"score_gpt":0.4068789247844863,"score_spread":0.3593918376817468,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}