{"id":"W2903079243","doi":"10.1186/s12014-018-9211-3","title":"The plasma peptidome","year":2018,"lang":"en","type":"article","venue":"Clinical Proteomics","topic":"Advanced Proteomics Techniques and Applications","field":"Chemistry","cited_by":28,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Windsor; Kingston General Hospital; Mount Sinai Hospital; St. Boniface Hospital; St. Michael's Hospital; McMaster University; Toronto Metropolitan University; Ottawa Hospital; Clinical Evaluation Research Unit; University of Manitoba; Ontario Institute for Cancer Research; University of Toronto","funders":"Ontario Institute for Cancer Research; Integrated BioBank of Luxembourg; Natural Sciences and Engineering Research Council of Canada; Heart and Stroke Foundation of Canada","keywords":"Chemistry; Chromatography; Electrospray ionization; Mass spectrometry; Ex vivo; Formic acid; Tandem mass spectrometry; Human plasma; Protein mass spectrometry; Electrospray; Biochemistry; In vitro","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004757253,0.0001238812,0.0001511325,0.000009223042,0.0004959397,0.00005604992,0.0005411142,0.0001903175,0.0001700634],"category_scores_gemma":[0.0004940713,0.0000875398,0.0001295657,0.00009076351,0.0007339663,0.0000475997,0.0001777722,0.0004584421,0.0003824915],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00003218341,"about_ca_system_score_gemma":0.00005225781,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000003042643,"about_ca_topic_score_gemma":0.000006442752,"domain_scores_codex":[0.9987633,0.00001796781,0.0005251472,0.0003110409,0.0001104423,0.0002720693],"domain_scores_gemma":[0.998453,0.0003808416,0.0001910684,0.0007472737,0.0001167332,0.0001110526],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.001279942,0.0009123643,0.017276,0.0001023856,0.000242276,0.00001088941,0.0002012205,0.00001363441,0.2646929,0.2897848,0.05429642,0.3711872],"study_design_scores_gemma":[0.0006568624,0.0001385256,0.000159275,0.00003039603,0.00001840745,0.00001086944,0.00004166572,0.002731764,0.2439837,0.1091888,0.6427083,0.0003314743],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.829509,0.00005232199,0.08065438,0.003406294,0.0002947336,0.0007575646,0.0000326241,0.0006232814,0.08466984],"genre_scores_gemma":[0.7078154,0.0004224151,0.2778533,0.0005406873,0.002812348,0.0006149755,0.00001320546,0.00006830198,0.009859386],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.5884119,"threshold_uncertainty_score":0.4916282,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.04115798562466132,"score_gpt":0.3743548914672244,"score_spread":0.3331969058425631,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}