{"id":"W2903298090","doi":"10.1128/mra.01477-18","title":"Complete Genome Sequence of Bradyrhizobium ottawaense OO99 <sup>T</sup> , an Efficient Nitrogen-Fixing Symbiont of Soybean","year":2018,"lang":"en","type":"article","venue":"Microbiology Resource Announcements","topic":"Legume Nitrogen Fixing Symbiosis","field":"Agricultural and Biological Sciences","cited_by":11,"is_retracted":false,"has_abstract":true,"ca_institutions":"Agriculture and Agri-Food Canada","funders":"Agriculture and Agri-Food Canada; Government of Canada","keywords":"Bradyrhizobium; Genome; Whole genome sequencing; Nitrogen fixation; Strain (injury); Biology; Symbiosis; Circular bacterial chromosome; Chromosome; Sequence (biology); Bradyrhizobium japonicum; Root nodule; Genetics; Bacteria; Rhizobiaceae; Gene","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006939446,0.0003709097,0.0005960521,0.00007298327,0.0003366706,0.00002801714,0.0009495905,0.0002595275,0.0003935698],"category_scores_gemma":[0.00005461899,0.0001916218,0.0002104521,0.0005550424,0.0009442577,0.00008705451,0.00031247,0.0001974664,0.0001152859],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00009334128,"about_ca_system_score_gemma":0.0000293262,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0004716393,"about_ca_topic_score_gemma":0.00009000086,"domain_scores_codex":[0.9970405,0.0003895176,0.0008214744,0.0007494366,0.0002225585,0.0007765879],"domain_scores_gemma":[0.9984888,0.0001291568,0.0005071339,0.0003252202,0.0003882749,0.0001614308],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001228301,0.0003127555,0.01701436,0.00001858502,0.000102482,0.000004572839,0.000749719,0.000007462296,0.9812371,0.00004588902,0.0001881909,0.0001960369],"study_design_scores_gemma":[0.003577591,0.01082157,0.01148177,0.0004528628,0.0003831816,0.0004493431,0.005654791,0.001036584,0.7919168,0.0003768773,0.1711206,0.002727972],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9929115,0.0001607206,0.000004379813,0.0001727867,0.0001003607,0.000422631,0.005791456,0.00007643491,0.0003597462],"genre_scores_gemma":[0.9952087,0.000001669723,0.0003014329,0.0004607436,0.0002420354,0.00001292853,0.003652802,0.000006198818,0.0001134934],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1893203,"threshold_uncertainty_score":0.781411,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02512013834745064,"score_gpt":0.2330950456194548,"score_spread":0.2079749072720041,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}