{"id":"W2904240523","doi":"10.1001/jamaoncol.2018.6012","title":"Assessment of<i>ERBB2</i>/<i>HER2</i>Status in<i>HER2</i>-Equivocal Breast Cancers by FISH and 2013/2014 ASCO-CAP Guidelines","year":2018,"lang":"en","type":"article","venue":"JAMA Oncology","topic":"Breast Cancer Treatment Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":37,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Alberta","funders":"National Cancer Institute","keywords":"Medicine; Breast cancer; Oncology; Internal medicine; Fluorescence in situ hybridization; Clinical trial; Cohort; Clinical Oncology; Fish <Actinopterygii>; Cancer; Chromosome; Gene","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0003274388,0.0003301414,0.0005427279,0.0000763137,0.00009825833,0.00002116695,0.000223522,0.0003386324,0.00008084314],"category_scores_gemma":[0.00007653761,0.0003064157,0.0000943744,0.0001446652,0.0006596356,0.00001559755,0.0003112571,0.0001690961,0.000008824533],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002953976,"about_ca_system_score_gemma":0.0005875669,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.005760861,"about_ca_topic_score_gemma":0.01354699,"domain_scores_codex":[0.9977911,0.000171379,0.0005566405,0.0006748129,0.0001974357,0.0006086878],"domain_scores_gemma":[0.9987315,0.0000573491,0.0002623367,0.0004165609,0.0003672027,0.000165041],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0006021563,0.0004099425,0.1474552,0.00006466171,0.0004417627,0.00001989659,0.0002266671,0.00003100133,0.07141969,0.00009429008,0.7216908,0.05754392],"study_design_scores_gemma":[0.004933993,0.001675679,0.3010314,0.00006424749,0.0001059441,0.0001436966,0.0003596754,0.0001241208,0.008590459,0.000072133,0.6824298,0.0004688561],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9685004,0.003626227,0.0003614042,0.01305477,0.0009797491,0.0005085631,0.0007570453,0.00003434539,0.01217754],"genre_scores_gemma":[0.9859151,0.004781655,0.002693561,0.00510432,0.0008471202,0.0001319912,0.0002164089,0.00004527331,0.0002645936],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1535762,"threshold_uncertainty_score":0.9999388,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01311089755748332,"score_gpt":0.3339736071521035,"score_spread":0.3208627095946202,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}