{"id":"W2904403583","doi":"10.1128/jvi.01679-18","title":"<i>Strawberry Mottle Virus</i> (Family <i>Secoviridae</i> , Order <i>Picornavirales</i> ) Encodes a Novel Glutamic Protease To Process the RNA2 Polyprotein at Two Cleavage Sites","year":2018,"lang":"en","type":"article","venue":"Journal of Virology","topic":"Plant Virus Research Studies","field":"Agricultural and Biological Sciences","cited_by":17,"is_retracted":false,"has_abstract":true,"ca_institutions":"Agriculture and Agri-Food Canada","funders":"Agriculture and Agri-Food Canada; Government of Canada","keywords":"Biology; Proteases; Protease; NS2-3 protease; Cysteine protease; Peptide sequence; Cleavage (geology); Picornavirus; RNA; Biochemistry; Virology; Enzyme; Gene","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0000753782,0.0003471645,0.0001963612,0.0001657653,0.0002247185,0.0004335544,0.0001178845,0.0002583535,0.0006177559],"category_scores_gemma":[0.0001187882,0.00007990576,0.0002870716,0.0001531194,0.000188089,0.0003470051,0.0001556242,0.0003553409,0.0003062965],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002647561,"about_ca_system_score_gemma":0.0001919714,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0005029399,"about_ca_topic_score_gemma":0.0007258623,"domain_scores_codex":[0.9999442,0.000006103782,0.000004360609,0.00001617015,0.00001523357,0.0000138183],"domain_scores_gemma":[0.9998974,0.00001251849,0.00004062404,0.000009652921,0.00001266176,0.000027213],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00007244015,0.00001552746,0.003234522,0.00004985076,0.000007134914,0.0003735406,0.00002787035,0.00005301007,0.9911874,0.0002063455,0.00008155477,0.004690938],"study_design_scores_gemma":[0.00001149089,0.0004531839,0.06050745,0.00001527875,0.00003641611,0.005549855,0.0001538584,0.001145626,0.9184839,0.000240314,0.01338928,0.0000132907],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9919142,0.001876718,0.004417797,0.00007662337,0.00003747714,0.00002301807,0.0003134997,0.00007715521,0.00126348],"genre_scores_gemma":[0.9852188,0.001049759,0.009995895,0.00006614938,0.00002680444,0.000008175101,0.001383695,0.00001867645,0.002232087],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0006177559,"threshold_uncertainty_score":0.002066553,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03064179236568834,"score_gpt":0.2890048896672984,"score_spread":0.25836309730161,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}