{"id":"W2904468693","doi":"10.1073/pnas.1808400115","title":"Repeat variants for the SbMATE transporter protect sorghum roots from aluminum toxicity by transcriptional interplay in <i>cis</i> and <i>trans</i>","year":2018,"lang":"en","type":"article","venue":"Proceedings of the National Academy of Sciences","topic":"Aluminum toxicity and tolerance in plants and animals","field":"Agricultural and Biological Sciences","cited_by":45,"is_retracted":false,"has_abstract":true,"ca_institutions":"Global Institute for Water Security; University of Saskatchewan","funders":"Conselho Nacional de Desenvolvimento Científico e Tecnológico; Fundação de Amparo à Pesquisa do Estado de Minas Gerais; Ministério da Ciência, Tecnologia e Inovação; Empresa Brasileira de Pesquisa Agropecuária","keywords":"Biology; Transposable element; Genetics; Transactivation; Repressor; Transcription factor; Promoter; Gene expression; Gene; Genome","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009595234,0.0001115137,0.0001681327,0.00001591656,0.0003577117,0.0000434193,0.0005662651,0.00009744976,0.00005666461],"category_scores_gemma":[0.00005322643,0.00003774638,0.00007995231,0.0002906043,0.0008695212,0.0003522384,0.00002566211,0.0001291654,3.090053e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000008451683,"about_ca_system_score_gemma":0.000007023194,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00007689613,"about_ca_topic_score_gemma":0.00001975531,"domain_scores_codex":[0.9986966,0.000008944502,0.0003250719,0.000290398,0.0004938331,0.0001851061],"domain_scores_gemma":[0.999438,0.0002394477,0.0001888317,0.000004701002,0.0000993297,0.0000296972],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001040057,0.00005297398,0.00303375,0.00001253982,0.00001028079,6.187736e-9,0.0002363781,0.000001310345,0.9926447,0.0009513194,0.0005782731,0.002374478],"study_design_scores_gemma":[0.0004042852,0.0003335184,0.3664326,0.0002249861,0.00002408672,0.000007447659,0.0003606094,0.001364082,0.5952276,0.03006305,0.005357534,0.0002001687],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9910539,0.0001861393,0.00001141451,0.007359088,0.00002903811,0.0003635355,0.0005706807,0.000007639128,0.0004186021],"genre_scores_gemma":[0.9987359,0.00006286622,0.0001561115,0.0007752137,0.0001697219,0.00002743934,0.000001435156,7.683922e-7,0.00007055754],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.3974171,"threshold_uncertainty_score":0.3203787,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02961838474709344,"score_gpt":0.2616850897938364,"score_spread":0.232066705046743,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}