{"id":"W2904855562","doi":"10.1111/nph.15641","title":"Advances in understanding obligate biotrophy in rust fungi","year":2018,"lang":"en","type":"review","venue":"New Phytologist","topic":"Yeasts and Rust Fungi Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":190,"is_retracted":false,"has_abstract":true,"ca_institutions":"Université du Québec à Trois-Rivières","funders":"Institut National de la Recherche Agronomique; Agence Nationale de la Recherche; Université du Québec à Trois-Rivières; Fonds de recherche du Québec – Nature et technologies; Université de Lorraine","keywords":"Obligate; Effector; Biology; Rust (programming language); Obligate parasite; Host (biology); Genomics; Computational biology; Transcriptome; Gene; Genome; Genetics; Botany; Gene expression; Cell biology","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0001486198,0.0004298845,0.001018928,0.0001987908,0.00006262772,0.00002794625,0.0003396134,0.000467311,0.0000268992],"category_scores_gemma":[0.00005456133,0.0003331521,0.0002565381,0.0003683971,0.0002384627,0.000005471233,0.0002328224,0.0002652271,0.00005443149],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001309591,"about_ca_system_score_gemma":0.0002273526,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00006251626,"about_ca_topic_score_gemma":0.001238939,"domain_scores_codex":[0.9981562,0.00009245596,0.0004986021,0.0006779538,0.0001070388,0.0004677366],"domain_scores_gemma":[0.9992738,0.00003081062,0.0002303125,0.0003733937,0.00001819902,0.00007353089],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.00007661292,0.0001338955,0.0009827607,0.005474008,0.000143332,0.00009781378,0.00004371251,0.00001045785,0.00005357129,0.00150349,0.01408332,0.977397],"study_design_scores_gemma":[0.0002860336,0.0001520424,0.00002264187,0.002427764,0.00004958683,0.0000154599,0.00004088467,6.090036e-7,0.00001746763,0.0003116098,0.9962862,0.000389725],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.00001440198,0.9919327,0.0002005277,0.00003896403,0.0004292464,0.0003477332,0.00003359687,0.00001380088,0.006988994],"genre_scores_gemma":[0.001051791,0.9973596,0.0002226788,0.00004427096,0.0006668542,0.00003507567,0.0001308433,0.00004094156,0.000447994],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.9822028,"threshold_uncertainty_score":0.999912,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.06282928064676031,"score_gpt":0.3347532895644933,"score_spread":0.271924008917733,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}