{"id":"W2905278757","doi":"10.1038/s41477-018-0329-0","title":"Sunflower pan-genome analysis shows that hybridization altered gene content and disease resistance","year":2018,"lang":"en","type":"article","venue":"Nature Plants","topic":"Sunflower and Safflower Cultivation","field":"Agricultural and Biological Sciences","cited_by":301,"is_retracted":false,"has_abstract":false,"ca_institutions":"University of British Columbia","funders":"Agence Nationale de la Recherche","keywords":"Introgression; Biology; Domestication; Sunflower; Genome; Genetics; Plant disease resistance; Gene; Helianthus; Gene pool; Genetic diversity; Horticulture; Population","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001388603,0.0001449729,0.0001777003,0.00003181074,0.000211911,0.00008106601,0.0001452872,0.0001317857,0.0002393338],"category_scores_gemma":[0.00009705681,0.0000595153,0.00007762223,0.0003469387,0.00005473452,0.0001559605,0.0000378762,0.0001365308,0.00001364351],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002116053,"about_ca_system_score_gemma":0.000006522917,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00003132376,"about_ca_topic_score_gemma":0.001542409,"domain_scores_codex":[0.9989264,0.00005321969,0.0001495975,0.0003852709,0.0002688036,0.0002167082],"domain_scores_gemma":[0.9994784,0.00007418264,0.00007491437,0.00008478795,0.0001113028,0.000176393],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.00128789,0.0002362679,0.3763663,0.0000178724,0.0005106807,0.00004799851,0.000445545,0.000005733662,0.6021865,0.0002135076,0.005016395,0.01366523],"study_design_scores_gemma":[0.0001591898,0.0000330113,0.9814304,0.00001087504,0.00009210641,0.000001445115,0.00005483557,0.00008475573,0.004194585,0.000116624,0.01364293,0.0001792983],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9969093,0.001071248,0.00006626541,0.0007049955,0.0002700427,0.0001713365,0.0004696329,0.00005765685,0.0002795509],"genre_scores_gemma":[0.9969591,0.00009598325,0.0001032827,0.0008059276,0.0004257965,0.000007841063,0.0008778844,0.000001242267,0.0007228788],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.605064,"threshold_uncertainty_score":0.2620537,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02888134899951459,"score_gpt":0.2276561728722028,"score_spread":0.1987748238726882,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}