{"id":"W2905625552","doi":"10.1016/j.jviromet.2018.12.001","title":"Development of an avian avulavirus 1 (AAvV-1) L-gene real-time RT-PCR assay using minor groove binding probes for application as a routine diagnostic tool","year":2018,"lang":"en","type":"article","venue":"Journal of Virological Methods","topic":"Virology and Viral Diseases","field":"Medicine","cited_by":45,"is_retracted":false,"has_abstract":false,"ca_institutions":"","funders":"Department for Environment, Food and Rural Affairs, UK Government","keywords":"Newcastle disease; Biology; Virology; Virus; Minor groove; Real-time polymerase chain reaction; Genotype; Polymerase chain reaction; Gene; Assay sensitivity; Molecular biology; Molecular diagnostics; Genetics; DNA; Medicine; Pathology","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.002026656,0.001527346,0.001092275,0.001019835,0.0005225627,0.0009560492,0.001462015,0.001056367,0.00258367],"category_scores_gemma":[0.001356065,0.001181333,0.000995329,0.0004165253,0.0008491781,0.0009723002,0.0005361215,0.002288686,0.001920872],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0005446554,"about_ca_system_score_gemma":0.0009910616,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0008017157,"about_ca_topic_score_gemma":0.001761442,"domain_scores_codex":[0.9981568,0.0003200605,0.0001447314,0.0006907192,0.000521311,0.0001664019],"domain_scores_gemma":[0.9988776,0.0004556803,0.0001416951,0.0001161502,0.0003092674,0.00009960464],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00004501404,0.00005363759,0.000309201,0.00008473974,0.000008393821,0.00002591895,0.00004779516,0.0001014792,0.9947508,0.0002921973,0.00009626707,0.004184491],"study_design_scores_gemma":[0.00003521645,0.0006658181,0.001289589,0.00003073324,0.00007683034,0.0002813604,0.0000428754,0.005365481,0.9837161,0.0003562988,0.008103345,0.00003627295],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"methods","genre_gemma":"methods","genre_scores_codex":[0.1667532,0.001508395,0.8205721,0.0004608678,0.0004717965,0.001308188,0.001637078,0.003037886,0.004250481],"genre_scores_gemma":[0.184594,0.0008777615,0.7999535,0.0004733385,0.0001014301,0.001843729,0.004253223,0.0003075975,0.007595426],"genre_candidate":"methods","genre_consensus":"methods","teacher_disagreement_score":0.00258367,"threshold_uncertainty_score":0.01071817,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.07763147524096058,"score_gpt":0.4378993552162226,"score_spread":0.3602678799752621,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}