{"id":"W2905838688","doi":"10.1111/jvh.13051","title":"Genomic variability of within‐host hepatitis C variants in acute infection","year":2018,"lang":"en","type":"article","venue":"Journal of Viral Hepatitis","topic":"Hepatitis C virus research","field":"Medicine","cited_by":9,"is_retracted":false,"has_abstract":true,"ca_institutions":"Centre Hospitalier de l’Université de Montréal","funders":"National Institute on Drug Abuse; National Institute of Allergy and Infectious Diseases; Rijksinstituut voor Volksgezondheid en Milieu; National Health and Medical Research Council; Medical Research Council; National Institutes of Health; Canadian Institutes of Health Research; University of New South Wales","keywords":"Nonsynonymous substitution; Biology; Viral quasispecies; Genetics; Single-nucleotide polymorphism; Virology; Viral load; Genotype; SNP; Genetic variation; Hepatitis C virus; Virus; Genome; Gene","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001893929,0.000201252,0.0007706688,0.0006045923,0.00006869186,0.00002747429,0.0001972879,0.0002059491,0.0006525742],"category_scores_gemma":[0.001040844,0.0001801298,0.0002113425,0.000581285,0.0003050825,0.0004446901,0.00009754839,0.0006561325,0.00007619192],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0005913886,"about_ca_system_score_gemma":0.0006762726,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.01128981,"about_ca_topic_score_gemma":0.004198277,"domain_scores_codex":[0.9968174,0.0003772861,0.00140197,0.0002431498,0.0007798197,0.0003804215],"domain_scores_gemma":[0.9975921,0.000146937,0.0006649357,0.0003775187,0.000961155,0.0002573543],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.000478433,0.0003267355,0.9602293,0.0000736591,0.0001863621,0.0003507163,0.0005634286,0.000003945348,0.03143244,0.0001692041,0.0005975147,0.005588267],"study_design_scores_gemma":[0.002049834,0.003501786,0.9794621,0.0003018506,0.0001162278,0.0003068542,0.000006150564,0.001210382,0.01129684,0.0007552184,0.0008468924,0.0001458269],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9939445,0.00006467836,0.001077158,0.000292389,0.0007559549,0.0003509234,0.00005194119,0.0000145951,0.003447814],"genre_scores_gemma":[0.9937473,0.001642695,0.003721762,0.0001773772,0.0005267725,0.000006447439,0.000006199979,0.0000345485,0.0001369271],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.02013561,"threshold_uncertainty_score":0.9952941,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02022682742282716,"score_gpt":0.3242554948751862,"score_spread":0.3040286674523591,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}