{"id":"W2907458544","doi":"10.1128/mra.01444-18","title":"Draft Genome Sequence of Azole-Resistant Aspergillus thermomutatus (Neosartorya pseudofischeri) Strain HMR-AF-39, Isolated from a Human Nasal Septum Abscess Aspirate","year":2019,"lang":"en","type":"article","venue":"Microbiology Resource Announcements","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":11,"is_retracted":false,"has_abstract":true,"ca_institutions":"Université Laval; Institut National de Santé Publique du Québec; Hôpital Maisonneuve-Rosemont; Université de Montréal","funders":"","keywords":"Aspergillus; Microbiology; Biology; Aspergillus fumigatus; Azole; Whole genome sequencing; Aspergillosis; Strain (injury); Genome; Antifungal; Gene; Genetics; Immunology; Anatomy","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.000555288,0.0005478478,0.00109355,0.0001557022,0.0002090604,0.00003414248,0.0005308706,0.0004924382,0.00171821],"category_scores_gemma":[0.00004552122,0.0004715855,0.0003033605,0.0003265726,0.0006604786,0.0001259531,0.0002090123,0.0006097345,0.0003731444],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002675123,"about_ca_system_score_gemma":0.0002627191,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0003309706,"about_ca_topic_score_gemma":0.0001055254,"domain_scores_codex":[0.9963706,0.0003042587,0.001046922,0.00107476,0.0002899317,0.0009135294],"domain_scores_gemma":[0.9977978,0.00007922459,0.0005094915,0.001091067,0.0003100516,0.0002123658],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","study_design_scores_codex":[0.00144665,0.0003308248,0.06957594,0.0001531308,0.0004740013,0.0001063765,0.0009634498,0.00001595525,0.9264275,0.00002807673,0.0003530965,0.000125031],"study_design_scores_gemma":[0.02715434,0.01074052,0.3652777,0.002108115,0.001230582,0.000145605,0.007519558,0.0003810682,0.05806888,0.0003381141,0.5233205,0.003715002],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9879302,0.001099309,0.00004393869,0.0001835239,0.0002114895,0.0009493039,0.00616195,0.0001003619,0.003319956],"genre_scores_gemma":[0.9853743,0.00002018457,0.0001321013,0.0009390887,0.00008530306,0.00001971041,0.00690677,0.00006437021,0.006458214],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.8683586,"threshold_uncertainty_score":0.9997736,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.0210099283537498,"score_gpt":0.2729535717882934,"score_spread":0.2519436434345436,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}