{"id":"W2908217616","doi":"10.15698/mic2019.01.665","title":"Guidelines for DNA recombination and repair studies: Mechanistic assays of DNA repair processes","year":2019,"lang":"en","type":"review","venue":"Microbial Cell","topic":"DNA Repair Mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":11,"is_retracted":false,"has_abstract":true,"ca_institutions":"Discovery Centre","funders":"National Institute of Environmental Health Sciences; National Institute of General Medical Sciences; Biotechnology and Biological Sciences Research Council; National Cancer Institute; National Institutes of Health; Agence Nationale de la Recherche; Wellcome Trust; U.S. Department of Defense","keywords":"DNA repair; Mutagenesis; DNA; Homologous recombination; Computational biology; Recombination; Biology; Genetics; Chemistry; Mutation; Gene","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.004146474,0.00244272,0.003025764,0.006959369,0.0008746001,0.002353156,0.004386187,0.004205274,0.01379898],"category_scores_gemma":[0.00404677,0.001095907,0.001652558,0.006055036,0.001867699,0.003769836,0.002032251,0.006013444,0.0279448],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.001741455,"about_ca_system_score_gemma":0.004383104,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.002595651,"about_ca_topic_score_gemma":0.003180844,"domain_scores_codex":[0.9970504,0.0006518223,0.0005092917,0.000285103,0.0013511,0.0001523143],"domain_scores_gemma":[0.9953619,0.001392425,0.0004017165,0.0003170145,0.002307353,0.0002195329],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0001320264,0.0002101069,0.0001665222,0.03752889,0.00007112565,0.0005387198,0.0003105939,0.0005004522,0.02091846,0.02982439,0.3949857,0.5148129],"study_design_scores_gemma":[0.000004202818,0.00001620505,0.00009081616,0.001413497,0.00001262591,0.0003153237,0.00002684454,0.00002089308,0.0007744869,0.002025994,0.9952846,0.00001462555],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"review","genre_gemma":"methods","genre_scores_codex":[0.0001908603,0.9624639,0.01179696,0.004870324,0.004249759,0.0003716496,0.001387848,0.0004461784,0.01422257],"genre_scores_gemma":[0.001014781,0.952345,0.02243854,0.003397033,0.001091311,0.000685942,0.002786039,0.0001526972,0.01608867],"genre_candidate":"methods","genre_consensus":null,"teacher_disagreement_score":0.01379898,"threshold_uncertainty_score":0.04616219,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.08979521820246256,"score_gpt":0.3588726551461066,"score_spread":0.269077436943644,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}