{"id":"W2908946283","doi":"10.1094/pdis-05-18-0905-re","title":"Applications of Next-Generation Sequencing for Large-Scale Pathogen Diagnoses in Soybean","year":2019,"lang":"en","type":"article","venue":"Plant Disease","topic":"Plant Pathogens and Fungal Diseases","field":"Biochemistry, Genetics and Molecular Biology","cited_by":26,"is_retracted":false,"has_abstract":true,"ca_institutions":"Brandon University","funders":"","keywords":"Biology; DNA sequencing; Pathogen; Cercospora; Outbreak; Botany; Leaf spot; Microbiology; Virology; Genetics; Gene","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001130967,0.0005032442,0.0004627723,0.001185343,0.000619901,0.000801046,0.0004273391,0.0007331678,0.0005724544],"category_scores_gemma":[0.001364583,0.0003850677,0.0005349995,0.0008843379,0.000299441,0.0002978088,0.000838501,0.0006326742,0.0003451253],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0009583863,"about_ca_system_score_gemma":0.001078348,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.01742913,"about_ca_topic_score_gemma":0.04361019,"domain_scores_codex":[0.9994192,0.0001023547,0.00003643063,0.0002251459,0.0001582105,0.00005868544],"domain_scores_gemma":[0.9993702,0.0001747159,0.0001300556,0.00005733253,0.0001970649,0.00007068202],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0003709347,0.00007647104,0.03790072,0.0004782084,0.0001604412,0.0005494771,0.0008363867,0.004928897,0.8985375,0.0006548595,0.001161793,0.05434423],"study_design_scores_gemma":[0.0001686382,0.0009225216,0.4872416,0.0005077332,0.0005417229,0.002160658,0.002739842,0.1133723,0.3220198,0.005485724,0.06461386,0.0002256076],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.8671412,0.006927238,0.0997557,0.000847782,0.0002005272,0.0004538767,0.01590816,0.001745823,0.007019671],"genre_scores_gemma":[0.770505,0.002240416,0.2081791,0.001096431,0.00004751286,0.0002600605,0.01524676,0.0002216428,0.002203117],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01742913,"threshold_uncertainty_score":0.03465533,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02182546968707868,"score_gpt":0.2392603191066543,"score_spread":0.2174348494195756,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}