{"id":"W2909175523","doi":"10.1128/mra.01483-18","title":"Complete Genome Sequence of Streptococcus mutans Strain LAB761, Which Harbors Several Bacteriocin Loci, Isolated from a Caries-Active Child in Canada","year":2019,"lang":"en","type":"article","venue":"Microbiology Resource Announcements","topic":"Oral microbiology and periodontitis research","field":"Dentistry","cited_by":1,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Toronto","funders":"Canadian Institutes of Health Research; Government of Canada","keywords":"Bacteriocin; Streptococcus mutans; Whole genome sequencing; Biology; Genetics; Genome; Strain (injury); Gene; Dental plaque; Lantibiotics; Chromosome; Microbiology; Bacteria","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0002644545,0.0004065694,0.0008272552,0.0001659323,0.0001488229,0.00003579185,0.000777267,0.0003780824,0.004244389],"category_scores_gemma":[0.00004927883,0.0004107291,0.00008515533,0.0006086442,0.0003003753,0.000136056,0.0003256245,0.0008452226,0.0002819573],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0008028435,"about_ca_system_score_gemma":0.001063542,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_topic_score_codex":0.6619865,"about_ca_topic_score_gemma":0.8981271,"domain_scores_codex":[0.9966964,0.0006155287,0.0007532273,0.0008488949,0.0001421838,0.0009437674],"domain_scores_gemma":[0.9986002,0.0001182962,0.0003164318,0.0006057593,0.0002451241,0.0001141991],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0004317549,0.0000577369,0.2642599,0.00002953404,0.0002292084,0.0001073629,0.0004734496,0.0001576515,0.733809,0.000004508041,0.0003396671,0.0001001875],"study_design_scores_gemma":[0.007436044,0.0008253866,0.5555133,0.0003758303,0.00006733288,0.0002280175,0.003200137,0.0003245999,0.004086645,0.00002394399,0.426404,0.001514685],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.8864698,0.0001856154,0.000009048868,0.0001578703,0.0003292824,0.0007703957,0.1111929,0.0000213404,0.00086369],"genre_scores_gemma":[0.9688755,0.0000159933,0.00003651667,0.0004278905,0.00004224705,0.00002597874,0.02965083,0.00003224634,0.0008928584],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.7297224,"threshold_uncertainty_score":0.9998345,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01510941452837103,"score_gpt":0.2405515621671807,"score_spread":0.2254421476388097,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}