{"id":"W2909433144","doi":"10.23860/diss-paight-christopher-2018","title":"A GENOMIC APPROACH TO THE COMPLEX RELATIONSHIP BETWEEN AN APICOMPLEXAN ENDOSYMBIONT AND ITS HOST","year":2018,"lang":"en","type":"dissertation","venue":"","topic":"Protist diversity and phylogeny","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Natural Sciences and Engineering Research Council of Canada; National Science Foundation","keywords":"Obligate; Biology; Mutualism (biology); Obligate parasite; Apicomplexa; Endosymbiosis; Parasitism; Evolutionary biology; Symbiosis; Host (biology); Protozoa; Genus; Zoology; Ecology; Bacteria; Genetics; Gene; Malaria; Plasmodium falciparum","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003930244,0.00059817,0.0005874859,0.001868869,0.0007135784,0.0009597794,0.0006497515,0.0007311698,0.001530403],"category_scores_gemma":[0.001100645,0.0003874987,0.0007907964,0.002216166,0.0004755419,0.0009386047,0.0009682144,0.001995072,0.0005267737],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0009185405,"about_ca_system_score_gemma":0.000980329,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.002741485,"about_ca_topic_score_gemma":0.006864295,"domain_scores_codex":[0.9997002,0.00005272693,0.00001403586,0.0001441992,0.00005073563,0.00003811621],"domain_scores_gemma":[0.9994399,0.000192328,0.0001404435,0.00006369727,0.0001004766,0.00006316843],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0001946248,0.0000683923,0.007456967,0.001008308,0.0001103798,0.0004384301,0.0007706714,0.001759741,0.9465966,0.003755628,0.0004468457,0.03739342],"study_design_scores_gemma":[0.00005736385,0.00135962,0.4581937,0.0008734372,0.001239277,0.004163869,0.004035789,0.0282236,0.295854,0.02138391,0.1844385,0.0001770768],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.6934345,0.01564302,0.2569332,0.002452438,0.00031395,0.0003557194,0.0178441,0.0007828212,0.01224025],"genre_scores_gemma":[0.6208429,0.009900516,0.3367881,0.001690355,0.0001904746,0.0003376465,0.02501765,0.0002379955,0.004994184],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.002741485,"threshold_uncertainty_score":0.006664515,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.06623211706842046,"score_gpt":0.2858598268972998,"score_spread":0.2196277098288794,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}