{"id":"W2909768010","doi":"10.1002/pmic.201800224","title":"Proteome Profile and Genome Refinement of the Tomato‐Pathogenic Bacterium <i>Clavibacter michiganensis</i> subsp. <i>michiganensis</i>","year":2019,"lang":"en","type":"article","venue":"PROTEOMICS","topic":"Plant Pathogenic Bacteria Studies","field":"Agricultural and Biological Sciences","cited_by":7,"is_retracted":false,"has_abstract":true,"ca_institutions":"Global Institute for Water Security; University of Saskatchewan","funders":"","keywords":"Clavibacter michiganensis; Proteome; Genome; Biology; Bacteria; Microbiology; Computational biology; Genetics; Gene","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003309761,0.0003249941,0.0004644828,0.00001691762,0.0001797003,0.00005706952,0.0004634185,0.0001553346,0.0001845636],"category_scores_gemma":[0.00003734073,0.0001231961,0.000164959,0.0002816899,0.0001346293,0.0001293828,0.0005248154,0.0002243268,0.00006985437],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00003079237,"about_ca_system_score_gemma":0.00002639493,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00004366599,"about_ca_topic_score_gemma":0.0001638922,"domain_scores_codex":[0.9980732,0.0001262725,0.000501466,0.0005351344,0.0002904328,0.0004735326],"domain_scores_gemma":[0.9991017,0.00007370621,0.0003581718,0.0002569541,0.0001158252,0.00009362099],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.00007438893,0.00005963087,0.01212122,0.00006456384,0.00003932287,0.000001623205,0.0001342589,5.746082e-7,0.9871144,0.00004212596,0.00005290131,0.0002949976],"study_design_scores_gemma":[0.0004603342,0.0002546718,0.6259571,0.0000979671,0.00005629928,0.00009999027,0.0001231083,0.00002069859,0.3610963,0.0001023295,0.01126735,0.0004638461],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9945802,0.0002062749,7.498589e-7,0.001436693,0.0002684279,0.00240891,0.0006150565,0.00006416505,0.0004195359],"genre_scores_gemma":[0.9974495,0.0001076168,0.001069046,0.0003996738,0.0001438154,0.0001597367,0.00009737838,0.000005951809,0.0005673506],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.626018,"threshold_uncertainty_score":0.5023791,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.004621967709520751,"score_gpt":0.1529429907272894,"score_spread":0.1483210230177686,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}