{"id":"W2909843219","doi":"10.1016/j.cimid.2019.01.008","title":"New sequence type ST3756 of Staphylococcus aureus subspecies anaerobius as the causative agent of abscessing lymphadenitis in sheep","year":2019,"lang":"en","type":"article","venue":"Comparative Immunology Microbiology and Infectious Diseases","topic":"Bacterial Identification and Susceptibility Testing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":false,"ca_institutions":"","funders":"Ministerstvo Zemědělství; Ministerstvo Školství, Mládeže a Tělovýchovy; Canadian Centre for Applied Research in Cancer Control","keywords":"Staphylococcus aureus; Multilocus sequence typing; Biology; Subspecies; Microbiology; Flock; Antibiotics; Virology; Outbreak; Vaccination; Gene; Genetics; Genotype; Bacteria; Zoology","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009430014,0.0001502779,0.000318118,0.0000753901,0.00007382732,0.00001177166,0.0001620232,0.0001192511,0.0001857515],"category_scores_gemma":[0.0001170034,0.0001219717,0.00005756779,0.0001575328,0.0006240513,0.00001192312,0.0001184515,0.0000944197,0.00001122813],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002493936,"about_ca_system_score_gemma":0.0001933867,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0002413724,"about_ca_topic_score_gemma":0.0003203655,"domain_scores_codex":[0.9988787,0.0003144927,0.0003213988,0.0002930393,0.0000234943,0.0001688648],"domain_scores_gemma":[0.9991928,0.0001004572,0.0002357855,0.0002688348,0.0001731787,0.00002899347],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0001555423,0.00006895637,0.2056625,0.00001442113,0.0001047825,9.057309e-7,0.0004488199,0.00002466959,0.7928182,0.0003294841,0.00008783382,0.0002839143],"study_design_scores_gemma":[0.001298299,0.0009732304,0.6845737,0.00005552186,0.00004531939,0.00004515875,0.001119041,0.00000881346,0.3096424,0.0003903559,0.001612733,0.0002353877],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9936846,0.005229258,0.00002877645,0.00004566279,0.0002757893,0.0002831986,0.00004865217,0.000008906318,0.0003950932],"genre_scores_gemma":[0.9992474,0.0002875173,0.00002674652,0.00006221065,0.00002485762,0.000007311566,0.0001238246,0.000006100834,0.0002140831],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.4831758,"threshold_uncertainty_score":0.4973859,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01987309546184979,"score_gpt":0.2805497151329108,"score_spread":0.260676619671061,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}