{"id":"W2911999291","doi":"10.1645/18-80","title":"Klossiella equi Infecting Kidneys of Ontario Horses: Life Cycle Features and Multilocus Sequence-Based Genotyping Confirm the Genus Klossiella Belongs in the Adeleorina (Apicomplexa: Coccidia)","year":2019,"lang":"en","type":"article","venue":"Journal of Parasitology","topic":"Coccidia and coccidiosis research","field":"Agricultural and Biological Sciences","cited_by":19,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Guelph","funders":"Natural Sciences and Engineering Research Council of Canada; University of Guelph","keywords":"Biology; Coccidia; Phylogenetic tree; Ribosomal DNA; Maximum parsimony; Mitochondrial DNA; Phylogenetics; 18S ribosomal RNA; Polymerase chain reaction; Evolutionary biology; Zoology; Genetics; Parasite hosting; Gene","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001116033,0.0001904963,0.000477734,0.00005751421,0.0002261664,0.00009227735,0.0006513114,0.0001750977,0.0002312842],"category_scores_gemma":[0.0003101799,0.00006586109,0.0001729987,0.0003473022,0.0002309426,0.0001038797,0.00009292254,0.0007578875,0.000008468957],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00008933264,"about_ca_system_score_gemma":0.0003165955,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_topic_score_codex":0.01283185,"about_ca_topic_score_gemma":0.03038671,"domain_scores_codex":[0.9978341,0.0005316337,0.0005624996,0.0002361419,0.0003968209,0.0004388458],"domain_scores_gemma":[0.9975426,0.001540306,0.0004636917,0.0001300787,0.0001859549,0.000137398],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0003276069,0.0001941263,0.8781409,0.00002996123,0.00006260665,0.00007800813,0.00214796,0.0002059225,0.09544488,0.0002297783,0.0002688644,0.02286933],"study_design_scores_gemma":[0.0006995645,0.001063755,0.9885173,0.00006659499,0.00003242637,0.0003473255,0.001272028,0.0001697078,0.002676512,0.0002645505,0.004730776,0.0001594136],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9939975,0.001160543,0.00000408976,0.003732185,0.0002163852,0.0003132436,0.000005019362,0.000005918788,0.0005651033],"genre_scores_gemma":[0.9991793,0.00009862204,0.00004770058,0.0004068671,0.0002224114,0.000007170408,0.000002944132,0.000001954714,0.00003305514],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1103764,"threshold_uncertainty_score":0.9937418,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03287946775115499,"score_gpt":0.2981359938654496,"score_spread":0.2652565261142946,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}