{"id":"W2912100687","doi":"10.3201/eid2503.180336","title":"<i>Mycobacterium avium</i> in Community and Household Water, Suburban Philadelphia, Pennsylvania, USA, 2010<i>–</i>2012","year":2019,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Mycobacterium research and diagnosis","field":"Medicine","cited_by":70,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Manitoba; University of Regina","funders":"","keywords":"Mycobacterium avium complex; Genotyping; Mycobacterium avium-intracellulare infection; Genotype; Biology; Mycobacterium; Colonization; Nontuberculous mycobacteria; Microbiology; Bacteria; Gene; Genetics","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0003918346,0.0003633779,0.00058523,0.0004106484,0.0002435616,0.0001152783,0.0001841387,0.0001408002,0.001977745],"category_scores_gemma":[0.0001729645,0.0003027791,0.0001630053,0.0003073228,0.0001460135,0.0005513207,0.0002895154,0.0007685048,0.0005336714],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000142341,"about_ca_system_score_gemma":0.00009579617,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.004075654,"about_ca_topic_score_gemma":0.0007031704,"domain_scores_codex":[0.9975855,0.00030979,0.0004130018,0.0004321593,0.0004037913,0.0008557457],"domain_scores_gemma":[0.9981417,0.0002702378,0.00007464128,0.0007855934,0.0001008251,0.0006270015],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0002241741,0.0009182056,0.9772691,0.0005625986,0.00006485814,0.00006101181,0.0003486832,0.00001153699,0.01257597,0.00002727565,0.007540529,0.0003961109],"study_design_scores_gemma":[0.003298695,0.0006210679,0.983259,0.0002563084,0.0001282297,0.00009979162,0.0001227974,0.00003914873,0.001810601,0.0001588057,0.009794547,0.0004109718],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9934587,0.001141395,0.000005816039,0.001135224,0.0006046752,0.0007408373,0.0001084636,0.0002118391,0.002592974],"genre_scores_gemma":[0.996416,0.0009314726,0.00001211711,0.00101329,0.000247736,0.0001051013,0.0001679489,0.00007131241,0.001034999],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01076537,"threshold_uncertainty_score":0.9999424,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01739046048330709,"score_gpt":0.2618916408276445,"score_spread":0.2445011803443375,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}