{"id":"W2913218375","doi":"10.1200/jco.2019.37.4_suppl.188","title":"Integrative molecular profiling and response to chemotherapy on the COMPASS trial.","year":2019,"lang":"en","type":"article","venue":"Journal of Clinical Oncology","topic":"Cancer Genomics and Diagnostics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":15,"is_retracted":false,"has_abstract":true,"ca_institutions":"McGill University Health Centre; University Health Network; Toronto General Hospital; University of Toronto; Ontario Institute for Cancer Research; Princess Margaret Cancer Centre","funders":"","keywords":"Medicine; Internal medicine; Chemotherapy; Oncology; Population; Cohort; Biopsy; Pathology","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.002940216,0.00009674624,0.0004433979,0.00003422253,0.0000232169,0.00001489967,0.0001925918,0.0001857479,0.0000199899],"category_scores_gemma":[0.004085341,0.00005687232,0.0001857734,0.00004741732,0.00007776912,0.000001795399,0.00006223383,0.0003222444,0.00001070489],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002982384,"about_ca_system_score_gemma":0.0005872003,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000002365268,"about_ca_topic_score_gemma":0.000005331824,"domain_scores_codex":[0.9984421,0.0004557707,0.0007040115,0.0001624197,0.0001163663,0.0001193838],"domain_scores_gemma":[0.9974058,0.001600016,0.0004735837,0.000199361,0.0001869474,0.0001342735],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"randomized_trial","study_design_gemma":"not_applicable","study_design_scores_codex":[0.5469437,0.001153239,0.003724662,0.00000803079,0.0005515682,0.00006849164,0.0002490903,0.0003704374,0.3733062,0.003316777,0.01980508,0.05050274],"study_design_scores_gemma":[0.05702744,0.09397014,0.009877808,0.00006877406,0.00007736238,0.00005613703,0.0006163372,0.0000960861,0.09708987,0.001180631,0.7396353,0.0003040889],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9827156,0.0001929076,0.0003527156,0.0144741,0.0007573849,0.0003419048,0.000003912779,0.000001048563,0.001160396],"genre_scores_gemma":[0.984942,0.0003368416,0.001422707,0.01259818,0.0004874901,0.000005721234,0.000001056882,0.00001182149,0.0001941703],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.7198302,"threshold_uncertainty_score":0.489083,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.05060127767840055,"score_gpt":0.4247411236847193,"score_spread":0.3741398460063187,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}