{"id":"W2913442998","doi":"10.1007/s10482-018-01223-x","title":"Description and genomic characterization of Massiliimalia massiliensis gen. nov., sp. nov., and Massiliimalia timonensis gen. nov., sp. nov., two new members of the family Ruminococcaceae isolated from the human gut","year":2019,"lang":"en","type":"article","venue":"Antonie van Leeuwenhoek","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":14,"is_retracted":false,"has_abstract":false,"ca_institutions":"Université Laval","funders":"Agence Nationale de la Recherche; Conseil Régional Provence-Alpes-Côte d'Azur; Fondation Méditerranée Infection","keywords":"Biology; Ruminococcus; Phylogenetic tree; Microbiology; Type species; Zoology; Taxonomy (biology); Phylogenetics; Feces; Genetics; Gene","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002432653,0.0007294203,0.0007080231,0.001689442,0.0003585935,0.0008027274,0.000404087,0.0005797363,0.0007428352],"category_scores_gemma":[0.0009550055,0.0002190234,0.0008056471,0.001928338,0.0003003365,0.0005740044,0.0006549156,0.000733497,0.0008557405],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002305228,"about_ca_system_score_gemma":0.0005720537,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.002416531,"about_ca_topic_score_gemma":0.00220377,"domain_scores_codex":[0.9998005,0.00002045722,0.00003595398,0.00006034235,0.00004031015,0.00004243081],"domain_scores_gemma":[0.999227,0.0002013053,0.0001911452,0.00009686224,0.0001856088,0.00009796739],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0009086213,0.0002702614,0.01818981,0.0008416912,0.00008514401,0.001667487,0.001199253,0.0008100288,0.9316403,0.0003252902,0.0008329196,0.04322929],"study_design_scores_gemma":[0.0002504063,0.00249414,0.6913397,0.0006137451,0.001258425,0.01420779,0.004641629,0.004235188,0.1991488,0.001087708,0.08051015,0.0002121362],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9499472,0.007359345,0.01014199,0.0007309853,0.0002505927,0.0006614397,0.02476925,0.0002047478,0.005934486],"genre_scores_gemma":[0.9102889,0.003712864,0.02416921,0.0005017266,0.0001785467,0.0007768374,0.05752254,0.00006825151,0.002781118],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.002416531,"threshold_uncertainty_score":0.004804969,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01155445312854877,"score_gpt":0.21749101013815,"score_spread":0.2059365570096012,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}