{"id":"W2913796898","doi":"10.1128/mra.01644-18","title":"Complete Genome Sequence of Escherichia coli Siphophage BRET","year":2019,"lang":"en","type":"article","venue":"Microbiology Resource Announcements","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":8,"is_retracted":false,"has_abstract":true,"ca_institutions":"Université Laval","funders":"China Scholarship Council; Canada Research Chairs; Human Frontier Science Program","keywords":"Escherichia coli; Lytic cycle; Genome; Whole genome sequencing; Gene; Sequence (biology); Biology; GC-content; Genetics; Virus","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.000153097,0.0001919724,0.0002814232,0.00003882689,0.00009547272,0.00001680031,0.0004150461,0.0001144141,0.009642],"category_scores_gemma":[0.000006767464,0.000182275,0.0000931919,0.0002006732,0.0003033876,0.0001211594,0.0003540954,0.0001804573,0.003811487],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001389213,"about_ca_system_score_gemma":0.00001244216,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0002451646,"about_ca_topic_score_gemma":0.00003187651,"domain_scores_codex":[0.9987093,0.0000848031,0.000341931,0.0004081116,0.00006498348,0.0003909026],"domain_scores_gemma":[0.9992985,0.00002842103,0.0002053618,0.0003884396,0.00001708378,0.00006217039],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","study_design_scores_codex":[0.00004707014,0.00008316273,0.004523244,0.00001095241,0.00003573415,0.000004099032,0.0002209447,0.0001053767,0.992616,0.000008571527,0.002244691,0.0001001765],"study_design_scores_gemma":[0.0004995224,0.000200229,0.007192728,0.0000179657,0.00001589317,0.00003315796,0.000101648,0.00002376108,0.00582747,0.000009520482,0.9858666,0.0002115017],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9863958,0.00004666229,0.00004933873,0.0001111817,0.0002496468,0.0003518927,0.002622651,0.00002827198,0.0101446],"genre_scores_gemma":[0.9816913,0.00001656374,0.0006019226,0.001598315,0.00003158675,0.00001330625,0.002209677,0.00002560487,0.0138117],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.9867885,"threshold_uncertainty_score":0.9969642,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01510221665059422,"score_gpt":0.2319316016449584,"score_spread":0.2168293849943642,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}