{"id":"W2914307217","doi":"10.1111/tpj.14270","title":"Limber pine (<i>Pinus flexilis</i> James) genetic map constructed by exome‐seq provides insight into the evolution of disease resistance and a genomic resource for genomics‐based breeding","year":2019,"lang":"en","type":"article","venue":"The Plant Journal","topic":"Yeasts and Rust Fungi Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":45,"is_retracted":false,"has_abstract":true,"ca_institutions":"Natural Resources Canada; Canadian Forest Service","funders":"U.S. Forest Service; Virginia Commonwealth University","keywords":"Biology; Genetics; Genome; Exome; Plant disease resistance; Exome sequencing; Evolutionary biology; Gene; Genomics; Synteny; Comparative genomics; Mutation","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009719554,0.0003531991,0.0002375954,0.0008933363,0.00054993,0.0004107072,0.0001638133,0.0001624837,0.002038799],"category_scores_gemma":[0.0001079627,0.0001390133,0.0004790885,0.0007907494,0.0001159483,0.0001727021,0.0003428259,0.000334578,0.0004913541],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003064528,"about_ca_system_score_gemma":0.0003780174,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.006940531,"about_ca_topic_score_gemma":0.01586504,"domain_scores_codex":[0.9999248,0.000002928695,0.000002536221,0.00003761816,0.00001874529,0.0000135069],"domain_scores_gemma":[0.9999399,0.000009375401,0.00001762911,0.000005033369,0.00001158161,0.00001640544],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0003124251,0.00006591771,0.02579689,0.0005323539,0.0001259403,0.0007491731,0.0003644414,0.001967561,0.9332922,0.001310796,0.003114626,0.03236772],"study_design_scores_gemma":[0.00007061588,0.0002068704,0.7716346,0.0001420812,0.0003447201,0.001707979,0.0005297639,0.01447686,0.1199347,0.001992832,0.08888157,0.00007745939],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.8928822,0.001113785,0.02829287,0.0001655391,0.00006080396,0.000098182,0.0684663,0.001185854,0.007734471],"genre_scores_gemma":[0.8279524,0.0008975905,0.03823641,0.0001681761,0.00002993384,0.0001763095,0.1230546,0.000335338,0.009149306],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.006940531,"threshold_uncertainty_score":0.01380026,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.006079756699060553,"score_gpt":0.1943813692975835,"score_spread":0.1883016125985229,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}