{"id":"W2914445827","doi":"10.1016/j.humimm.2019.01.009","title":"Quality control project of NGS HLA genotyping for the 17th International HLA and Immunogenetics Workshop","year":2019,"lang":"en","type":"review","venue":"Human Immunology","topic":"Immune Cell Function and Interaction","field":"Immunology and Microbiology","cited_by":34,"is_retracted":false,"has_abstract":false,"ca_institutions":"McGill University Health Centre","funders":"National Institute of Neurological Disorders and Stroke; National Institute of Allergy and Infectious Diseases; National Institute of General Medical Sciences; National Institute for Health and Care Research","keywords":"Human leukocyte antigen; Concordance; Genotyping; Typing; Genotype; Immunogenetics; Allele; HLA-C; Genetics; Biology; Gene; Antigen","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.02575734,0.001127474,0.002080331,0.003280073,0.0004284659,0.002357333,0.002890647,0.00205895,0.003304066],"category_scores_gemma":[0.01166342,0.0004502261,0.001102895,0.002031043,0.001388098,0.001260779,0.001936622,0.002995951,0.002314522],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.002462028,"about_ca_system_score_gemma":0.007310224,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.003775387,"about_ca_topic_score_gemma":0.002393139,"domain_scores_codex":[0.993933,0.002327553,0.0006244446,0.0008187381,0.001955316,0.0003408226],"domain_scores_gemma":[0.9849075,0.005576738,0.001272794,0.0008268901,0.00664393,0.0007720838],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0002814288,0.00009761741,0.001671381,0.004234163,0.0001338124,0.0001766824,0.00008810558,0.0003604667,0.00228304,0.004371473,0.06088436,0.9254175],"study_design_scores_gemma":[0.0000993265,0.0002359332,0.008769518,0.006870711,0.0003673751,0.00121418,0.0001304218,0.0008624301,0.005260574,0.004892882,0.9712338,0.00006282536],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.00105111,0.9625075,0.01676677,0.009429196,0.005933411,0.0001750845,0.0006392269,0.000269539,0.003228166],"genre_scores_gemma":[0.01723093,0.9111044,0.03651489,0.01359875,0.006026746,0.0005143502,0.006000102,0.0002743157,0.008735518],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.02575734,"threshold_uncertainty_score":0.1362195,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.1123955931581088,"score_gpt":0.3902640049391085,"score_spread":0.2778684117809996,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}