{"id":"W2914538875","doi":"10.1016/j.gene.2019.01.022","title":"A comprehensive analysis of chimpanzee (Pan troglodytes)-specific LINE-1 retrotransposons","year":2019,"lang":"en","type":"article","venue":"Gene","topic":"Chromosomal and Genetic Variations","field":"Agricultural and Biological Sciences","cited_by":5,"is_retracted":false,"has_abstract":false,"ca_institutions":"Brock University","funders":"Dankook University","keywords":"Retrotransposon; Biology; Genome; Genetics; Genome evolution; Evolutionary biology; Human genome; Primate; Transposable element; Gene","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001531996,0.0004127308,0.0003016991,0.001244422,0.0003707391,0.0003032066,0.0002085261,0.0002706801,0.00120437],"category_scores_gemma":[0.0002167889,0.0001751438,0.0002972834,0.001029209,0.0001808361,0.0001420513,0.000268469,0.0003985283,0.0002854458],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001086079,"about_ca_system_score_gemma":0.0002583136,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0008156092,"about_ca_topic_score_gemma":0.002764622,"domain_scores_codex":[0.9998872,0.00001253835,0.000009679696,0.00004457741,0.00002953389,0.00001646132],"domain_scores_gemma":[0.9998602,0.00003383565,0.00003100702,0.00001917683,0.00002033079,0.00003546155],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0001294126,0.00002313825,0.006977506,0.0001183859,0.00005104667,0.0003450775,0.0001051347,0.0001265811,0.9807231,0.0001207673,0.00007445345,0.0112054],"study_design_scores_gemma":[0.00007545535,0.000739944,0.6365248,0.00009597597,0.0008476885,0.01132237,0.0005083359,0.001404717,0.3118777,0.0006014575,0.03594904,0.0000525584],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9854085,0.002269647,0.006450662,0.00004104942,0.00001347791,0.00007016612,0.004172541,0.0001022504,0.001471836],"genre_scores_gemma":[0.9670401,0.002044226,0.01608578,0.0000846255,0.00002006445,0.00006285679,0.01278528,0.00007355028,0.001803482],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001244422,"threshold_uncertainty_score":0.004029036,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02296216984877737,"score_gpt":0.2197900448105972,"score_spread":0.1968278749618198,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}