{"id":"W2914667494","doi":"10.1093/molbev/msz016","title":"Rapid Genetic Code Evolution in Green Algal Mitochondrial Genomes","year":2019,"lang":"en","type":"article","venue":"Molecular Biology and Evolution","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":28,"is_retracted":false,"has_abstract":true,"ca_institutions":"McGill University; Montreal Clinical Research Institute; Université de Montréal","funders":"Fonds de recherche du Québec – Nature et technologies; Natural Sciences and Engineering Research Council of Canada","keywords":"Biology; Genetic code; Codon usage bias; Genetics; Transfer RNA; Mitochondrial DNA; Genome; Gene; Stop codon; Evolutionary biology; RNA","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003184048,0.0001463245,0.0002028018,0.001074485,0.0005096394,0.0005398134,0.0002459114,0.0003980199,0.0003464818],"category_scores_gemma":[0.001373032,0.000148721,0.0003270167,0.0007161208,0.0002954919,0.0003674035,0.0005197114,0.0003691344,0.0001429391],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0008424376,"about_ca_system_score_gemma":0.0003775089,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001676791,"about_ca_topic_score_gemma":0.002761931,"domain_scores_codex":[0.9997178,0.00003649747,0.00001674077,0.0001059722,0.00008155303,0.00004156924],"domain_scores_gemma":[0.9991705,0.0002075863,0.0002756447,0.00009314695,0.0001463882,0.000106684],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0003445592,0.00004112741,0.06766339,0.0001378301,0.00005659686,0.0005192938,0.0009500267,0.003059628,0.900807,0.002546553,0.00009257171,0.0237814],"study_design_scores_gemma":[0.00004301696,0.0005530131,0.7903555,0.00007950015,0.0001288837,0.002185547,0.001272494,0.03350948,0.1548778,0.005637585,0.01125666,0.0001005043],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9970842,0.0001993083,0.001977892,0.00002646026,0.000002871184,0.000008002276,0.0001918827,0.00004256322,0.0004667903],"genre_scores_gemma":[0.9927573,0.0001326176,0.006109591,0.00002311466,0.000003301089,0.00001085402,0.0007009442,0.00002308173,0.0002391711],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001676791,"threshold_uncertainty_score":0.006112337,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.005170482350475314,"score_gpt":0.2215012125620441,"score_spread":0.2163307302115688,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}