{"id":"W2914759262","doi":"10.3390/v11080677","title":"Viral Long-Term Evolutionary Strategies Favor Stability over Proliferation","year":2019,"lang":"en","type":"preprint","venue":"Viruses","topic":"Evolution and Genetic Dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Ottawa","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Viral evolution; Biology; Selection (genetic algorithm); Mutation; Evolutionary biology; Viral replication; Virus; Mutation rate; Genetics; Genome; Rate of evolution; RNA; Molecular evolution; DNA; Gene; Phylogenetics","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002903103,0.0002233663,0.0002623294,0.0004391705,0.0003667617,0.001012353,0.0002336784,0.000490958,0.001229726],"category_scores_gemma":[0.0008133147,0.0001780286,0.0002711606,0.0004564545,0.0006082713,0.000722812,0.0004285664,0.0004019278,0.0004150514],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0004119635,"about_ca_system_score_gemma":0.0002808047,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0003466248,"about_ca_topic_score_gemma":0.0005199991,"domain_scores_codex":[0.9997897,0.00003026492,0.00001090637,0.00008390656,0.000046503,0.00003874555],"domain_scores_gemma":[0.9995827,0.00009734862,0.0001598884,0.00004729878,0.00005584336,0.00005684911],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"simulation_or_modeling","study_design_scores_codex":[0.0002694649,0.00006507339,0.06146194,0.000240356,0.0001226712,0.0004351729,0.000436222,0.006516236,0.8856906,0.01504896,0.0003089228,0.02940426],"study_design_scores_gemma":[0.00006300831,0.0006339466,0.3984536,0.0001035864,0.0002299009,0.004393101,0.001381465,0.04497682,0.4942293,0.04011123,0.01531557,0.0001085139],"study_design_candidate":"simulation_or_modeling","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9876862,0.001150812,0.00768029,0.00009879441,0.00001011864,0.000008446624,0.00008565466,0.00006886091,0.003210781],"genre_scores_gemma":[0.9965166,0.0003804782,0.002133247,0.00003251392,0.00001142345,0.000006989387,0.00008989425,0.00001950626,0.0008093489],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001229726,"threshold_uncertainty_score":0.004113853,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.0226850912605965,"score_gpt":0.2971517405469439,"score_spread":0.2744666492863475,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}