{"id":"W2915179179","doi":"10.1093/gbe/evz038","title":"Rapid Divergence Followed by Adaptation to Contrasting Ecological Niches of Two Closely Related Columbine Species<i>Aquilegia japonica</i>and<i>A. oxysepala</i>","year":2019,"lang":"en","type":"article","venue":"Genome Biology and Evolution","topic":"Genetic diversity and population structure","field":"Biochemistry, Genetics and Molecular Biology","cited_by":14,"is_retracted":false,"has_abstract":true,"ca_institutions":"McGill University and Génome Québec Innovation Centre","funders":"Fudan University; National Natural Science Foundation of China","keywords":"Biology; Allopatric speciation; Evolutionary biology; Adaptive radiation; Genetic divergence; Gene flow; Adaptation (eye); Natural selection; Genetic algorithm; Ecological niche; Local adaptation; Population; Ecology; Genetic diversity; Genetic variation; Genetics; Gene; Phylogenetics; Habitat","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000190249,0.000121463,0.0001903572,0.00003049168,0.0001047947,0.000009426935,0.00009579951,0.0002393916,0.00007936082],"category_scores_gemma":[0.0000637163,0.000121801,0.00004422549,0.00009467175,0.0001219715,0.00000779218,0.0001253809,0.00007784018,0.00001207536],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001447602,"about_ca_system_score_gemma":0.0000273081,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00003933451,"about_ca_topic_score_gemma":0.00002703727,"domain_scores_codex":[0.9990808,0.0001015795,0.0002247372,0.0003488503,0.00005053671,0.0001935024],"domain_scores_gemma":[0.999563,0.00002524811,0.0001222036,0.0001337605,0.00007858293,0.00007715647],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0001409783,0.0000210395,0.1366338,0.00001231826,0.00004779326,2.47282e-7,0.0001340486,0.0001407292,0.8612365,0.000953345,0.0003987525,0.0002804115],"study_design_scores_gemma":[0.00205037,0.001421893,0.9707034,0.00001151948,0.0000697615,0.00001611779,0.0003550613,0.0003230165,0.004998041,0.001322021,0.01838354,0.0003452314],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9960019,0.001677924,0.001132447,0.0001482164,0.00021579,0.0002685417,0.00007292553,0.00001029745,0.0004719408],"genre_scores_gemma":[0.9982151,0.000198298,0.0005582727,0.000156506,0.00004479627,0.000004500531,0.0003278555,0.000005218572,0.0004894104],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.8562384,"threshold_uncertainty_score":0.4966901,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.009335844048542898,"score_gpt":0.2176889665897991,"score_spread":0.2083531225412562,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}