{"id":"W2915498630","doi":"10.1016/j.ijpara.2018.12.001","title":"Next generation sequencing from Hepatozoon canis (Apicomplexa: Coccidia: Adeleorina): Complete apicoplast genome and multiple mitochondrion-associated sequences","year":2019,"lang":"en","type":"article","venue":"International Journal for Parasitology","topic":"Coccidia and coccidiosis research","field":"Agricultural and Biological Sciences","cited_by":48,"is_retracted":false,"has_abstract":false,"ca_institutions":"University of Guelph","funders":"Natural Sciences and Engineering Research Council of Canada; Government of Ontario; University of Guelph","keywords":"Biology; Apicoplast; Genetics; Genome; Mitochondrial DNA; Ribosomal RNA; Gene; Plastid","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002312402,0.000194111,0.0003110559,0.00005577283,0.0003563082,0.0003227479,0.0004875855,0.0001600869,0.0006022021],"category_scores_gemma":[0.0001812847,0.0001028589,0.0001416247,0.0001170947,0.00006895536,0.0003145187,0.0001010202,0.0002857338,0.0000669599],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002662998,"about_ca_system_score_gemma":0.00006147329,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.002172166,"about_ca_topic_score_gemma":0.006929689,"domain_scores_codex":[0.9982201,0.0001723936,0.0004031043,0.0003987364,0.0004089621,0.000396708],"domain_scores_gemma":[0.9983917,0.0007037942,0.0002430071,0.00005725683,0.0004381846,0.0001660444],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0001110933,0.00003648748,0.1913723,0.000001549967,0.0001367753,0.00002466522,0.00009885129,0.00007883701,0.8020238,0.0001229135,0.00032424,0.005668421],"study_design_scores_gemma":[0.003494739,0.001815638,0.8673216,0.0001054916,0.00007704098,0.0009082968,0.001571009,0.04263456,0.01780957,0.003646085,0.05959614,0.001019899],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.994574,0.0004506849,0.00009636182,0.002216731,0.001917481,0.000318574,0.000320543,0.00002992291,0.00007576426],"genre_scores_gemma":[0.9972357,0.0003380656,0.000228892,0.0002930838,0.001185814,0.00002362914,0.0005605823,0.000003208959,0.0001309893],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.7842143,"threshold_uncertainty_score":0.6593691,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.0886625487974079,"score_gpt":0.3083853941610735,"score_spread":0.2197228453636656,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}