{"id":"W2915638151","doi":"10.1038/s41467-019-08809-7","title":"Hybridization is a recurrent evolutionary stimulus in wild yeast speciation","year":2019,"lang":"en","type":"article","venue":"Nature Communications","topic":"Fermentation and Sensory Analysis","field":"Agricultural and Biological Sciences","cited_by":86,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Toronto; Université Laval; PROTEO","funders":"Natural Sciences and Engineering Research Council of Canada; Genome Canada","keywords":"Reproductive isolation; Biology; Sympatric speciation; Hybrid zone; Genetic algorithm; Evolutionary biology; Incipient speciation; Genetics; Hybrid; Genome; Species complex; Ecological speciation; Gene; Gene flow; Genetic variation; Phylogenetic tree","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001078483,0.00007107703,0.00009147159,0.00003511077,0.0001270365,0.00002725671,0.0003516481,0.0001081388,0.0007177275],"category_scores_gemma":[0.00003776326,0.00003614911,0.00005742678,0.0006556151,0.0000234842,0.0001460762,0.00007884059,0.0002965073,0.0002405845],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00007878851,"about_ca_system_score_gemma":0.000008603241,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00004914905,"about_ca_topic_score_gemma":0.001384701,"domain_scores_codex":[0.9992724,0.0001267832,0.0001832207,0.0001582114,0.0001584967,0.0001008734],"domain_scores_gemma":[0.999473,0.0001092344,0.00007993512,0.0002127504,0.00009262885,0.00003247227],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0001514102,0.001813203,0.6671696,0.00001927367,0.0001023652,0.0000020804,0.001838629,0.0006640425,0.09164754,0.03128143,0.04577088,0.1595396],"study_design_scores_gemma":[0.000197441,0.00004605236,0.8993266,0.00002303002,0.00001309611,0.000002408605,0.0004392769,0.01238811,0.0002322308,0.0005266392,0.08664947,0.0001557056],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9798083,0.0008278667,0.000003170602,0.01313621,0.000128447,0.000262582,0.0000681053,0.00004498108,0.005720347],"genre_scores_gemma":[0.9972934,0.0003931817,0.00031452,0.0006685478,0.00004248023,0.00001176466,0.0007074473,6.84132e-7,0.000568006],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.232157,"threshold_uncertainty_score":0.7858613,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02140545514269612,"score_gpt":0.2694465738352644,"score_spread":0.2480411186925683,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}