{"id":"W2916077329","doi":"10.1016/j.vetmic.2019.02.031","title":"Diversity of CTX-M-positive Escherichia coli recovered from animals in Canada","year":2019,"lang":"en","type":"article","venue":"Veterinary Microbiology","topic":"Antibiotic Resistance in Bacteria","field":"Biochemistry, Genetics and Molecular Biology","cited_by":66,"is_retracted":false,"has_abstract":true,"ca_institutions":"Agriculture and Agri-Food Canada; Public Health Agency of Canada; University of Guelph","funders":"Canadian Institutes of Health Research; Beef Cattle Research Council","keywords":"Biology; Escherichia coli; Genetic diversity; Gene; Genome; Livestock; Genetics; Enterobacteriaceae; Mobile genetic elements; Bacteria; Microbiology; Ecology","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001888639,0.0002009497,0.000211338,0.001774201,0.001442251,0.0009367812,0.0005028088,0.0003190512,0.001605221],"category_scores_gemma":[0.0006363392,0.000148769,0.0001674548,0.002160237,0.0006412236,0.0001191941,0.0003535009,0.0003263549,0.0002254099],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.004949451,"about_ca_system_score_gemma":0.005506506,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_topic_score_codex":0.9182595,"about_ca_topic_score_gemma":0.972307,"domain_scores_codex":[0.9994577,0.00002350383,0.00002345811,0.0001023528,0.0002038421,0.0001891372],"domain_scores_gemma":[0.9994614,0.00003118263,0.00005327735,0.00001700506,0.000290112,0.000147099],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0003368436,0.00006788084,0.922978,0.00008719764,0.00007176623,0.00128479,0.002290565,0.0002595061,0.05465051,0.0004560715,0.0008557423,0.01666109],"study_design_scores_gemma":[0.000003301763,0.00003206638,0.9944495,0.00001741631,0.00001287038,0.0006043585,0.001836141,0.00008475336,0.001108612,0.00001557497,0.001828974,0.000006454668],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9931929,0.0004327501,0.000231009,0.0001185131,0.00001115572,0.00003996568,0.002090991,0.000006683817,0.003876162],"genre_scores_gemma":[0.9964548,0.0004618104,0.0003188326,0.00008417238,0.000002709856,0.000006943877,0.001093322,0.000004242963,0.001573045],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0817405,"threshold_uncertainty_score":0.1644437,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.009246349198569936,"score_gpt":0.2079116639261733,"score_spread":0.1986653147276033,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}