{"id":"W2917181170","doi":"10.1186/s12864-018-5400-8","title":"A dynamic degradome landscape on miRNAs and their predicted targets in sugarcane caused by Sporisorium scitamineum stress","year":2019,"lang":"en","type":"article","venue":"BMC Genomics","topic":"Sugarcane Cultivation and Processing","field":"Agricultural and Biological Sciences","cited_by":21,"is_retracted":false,"has_abstract":true,"ca_institutions":"Ministry of Agriculture","funders":"Program for New Century Excellent Talents in University; Fujian Agriculture and Forestry University; Natural Science Foundation of Fujian Province; National Natural Science Foundation of China","keywords":"KEGG; Biology; Gene; Metabolic pathway; Smut; Genetics; Phenylpropanoid; Computational biology; Botany; Gene expression; Transcriptome; Biosynthesis","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001269648,0.0003945731,0.0003692002,0.0005453884,0.0004760678,0.0004707921,0.0001600105,0.0003423321,0.0009025125],"category_scores_gemma":[0.0001713775,0.0001548381,0.0003060583,0.0006352624,0.0002135204,0.000334645,0.0003007152,0.0003459477,0.000238622],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000426855,"about_ca_system_score_gemma":0.0002792336,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.002197984,"about_ca_topic_score_gemma":0.002516711,"domain_scores_codex":[0.9998637,0.000006199286,0.000006461539,0.00005614104,0.0000363267,0.00003111288],"domain_scores_gemma":[0.9998617,0.00002220126,0.00004380687,0.000007338477,0.00003858591,0.00002620607],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0002131555,0.00001122007,0.003111278,0.00008439815,0.00001199277,0.0001563406,0.00009909504,0.000155485,0.9929305,0.00008260818,0.000115421,0.003028512],"study_design_scores_gemma":[0.00001344928,0.0002819032,0.4113674,0.00003628896,0.0001203488,0.0007805917,0.0007953654,0.007333104,0.5682809,0.0005558201,0.01036288,0.00007195069],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9917606,0.00142928,0.002628473,0.00006855992,0.00001366207,0.00002029364,0.002727951,0.0001121935,0.001238939],"genre_scores_gemma":[0.9884208,0.0008521641,0.003476075,0.0001056724,0.00001124535,0.00007357299,0.00495237,0.0000461148,0.002061986],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.002197984,"threshold_uncertainty_score":0.004370391,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.0121394920103959,"score_gpt":0.2015769385358208,"score_spread":0.1894374465254249,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}