{"id":"W2919018280","doi":"10.1186/s12862-019-1346-y","title":"DNA barcoding a unique avifauna: an important tool for evolution, systematics and conservation","year":2019,"lang":"en","type":"article","venue":"BMC Evolutionary Biology","topic":"Identification and Quantification in Food","field":"Biochemistry, Genetics and Molecular Biology","cited_by":39,"is_retracted":false,"has_abstract":true,"ca_institutions":"Royal Ontario Museum; Hospital for Sick Children; University of Toronto","funders":"University of Illinois at Urbana-Champaign; Victoria University; University of Auckland; Massey University; H. Wilhelm Schaumann Stiftung; National Institute of Water and Atmospheric Research; Ontario Genomics Institute; University of New South Wales; Victoria University of Wellington; Ontario Genomics; Genome Canada; Natural Sciences and Engineering Research Council of Canada; University of Otago; Allan Wilson Centre","keywords":"DNA barcoding; Biology; Phylogenetic tree; GenBank; Evolutionary biology; Subspecies; Taxon; Systematics; Phylogenetics; Mitochondrial DNA; Lineage (genetic); Species complex; Zoology; Ecology; Taxonomy (biology); Genetics; Gene","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005286787,0.0001432204,0.0001693264,0.00008064857,0.0001636798,0.0000219082,0.0001477301,0.0002296692,0.00002901301],"category_scores_gemma":[0.0002439721,0.0001420269,0.00006468662,0.00009020101,0.0001114215,0.0000162698,0.00004934441,0.00005106135,0.00002612217],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00003185886,"about_ca_system_score_gemma":0.0001833177,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00001309574,"about_ca_topic_score_gemma":0.00002393163,"domain_scores_codex":[0.9986311,0.0001687964,0.0004810154,0.0004502188,0.00006632837,0.0002024943],"domain_scores_gemma":[0.9989038,0.00006168942,0.0002357602,0.0004257045,0.0003144832,0.0000586194],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.00009735806,0.00007073741,0.2234113,0.0002013669,0.00003659954,7.577703e-8,0.00003027463,0.00002139985,0.5825608,0.1910684,0.002472261,0.00002951768],"study_design_scores_gemma":[0.005353286,0.002161313,0.7058818,0.0002015502,0.0001923038,0.0003675387,0.001584787,0.05248517,0.06433051,0.02022899,0.1451612,0.00205155],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9077561,0.0006153086,0.08970224,0.0003104254,0.0004291275,0.0009166293,0.0001234603,0.00003849448,0.0001081995],"genre_scores_gemma":[0.9900467,0.00004241873,0.006850126,0.000184378,0.0001451104,0.0001749603,0.001436161,0.00001887791,0.001101292],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.5182303,"threshold_uncertainty_score":0.579169,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02329437921791585,"score_gpt":0.2806117230955767,"score_spread":0.2573173438776609,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}